Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1314 |
Symbol | |
ID | 4451059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1445137 |
End bp | 1446516 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639693351 |
Product | MATE efflux family protein |
Protein accession | YP_834959 |
Protein GI | 116689336 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAT CCGCCTTACC GCTCGGGGCC GGCAGCGCGT CGGCCGCCGT CACGCATCGG CGCGTCCTCG CGCTCGCTTT CCCGATCGTC CTTGCGAATC TGACCCAGCC GATCCTCGGC GCCGTCGACA CGGCCGTCGC CGGCCACCTC GACGGGACGC AATATCTCGG CGGTGTCGCG CTCGGCGGGC TGTTCTTCAA TTTCGTGTTC TGGGGCTTCG GCTTCCTGCG GATGGGGACG ACCGGCCTCG TCGCACAGGC GCATGGCGCC GGCGACGCCG CCGGAATCCG CCTGAACCTG CTGCGCGCGC TGATCGTCGC GTTCGCGCTC GGCGCCGCGG TGCTGGCGCT GCAGGTGCCG CTGCTGTCGT TCGCGCTGTC CGCGCTCGGC GGCAGCGATG CCGTCCGCGC GACGGCGCTC GCATACAGCC ACGCACGGAT CTGGAGCGCA CCGTTCGCGC TCGCGAACTA CGTGGTGCTC GGCTACCTGC TGGGCGTGCA GCGCGTCCGG CTCGCACTCG TCGCGCAGGT GTTCATCAAC GCGGTGAACA TCGGCGCCGT GCTGCTCTAC GTGTACGGTT TCGGCTGGGG CATCGCCGGC ATCGGCGCAG CGACCGCCAC CGCGGACGCG TGCGGTTTCG CGCTCGGCGC GTGGATGCTG TGGCGGCTGC GGCCGCGCGG CCTTGCACCG CTCGCGGTAC GCGCGCTTGC CGACCGCGTC GCGCTCAAGC GGCTGATCGC GCTCAATCGC GACATCTTCC TGCGCACGCT GTGCCTGCTC GGCGCGTTCG GCTGGTTCGC GCATCTCGGC GCGAAACAAG GCGACGCGAC GCTCGCCGCG AATGCGCTAC TGCTGAATTT CCAGACCTTC ATGGCGTACG GCCTCGACGG CTTCGCGCAT GCGGCCGAGG CGCTCGTCGG CGCGGCGGCC GGCGCGCGCG ATCGCCGCGC CTTCCGGCAA GCCGTGCGCG TCACGCTGTT CTGGTCGGCA CTCGGCGCGC TGCTGTTCGC GCTCGTTTAC TGGGCGGCGG GCGGCTGGAT CGTTGCGCGC CTGACCGACC AGGCCGAGAT CCGCGCCGTC GCGCTGCGCT ACCTGCCGTG GGCCGCGATC TCGCCGATCG TGTCGGTCTG GGGTTTCCTG CTCGACGGCG TGTTCATCGG CGCTACGCAG ACGCAATCGC TGATGCGCGC GATGGTCGTG TCGTTGTCGA TCTTCGTCGC GGCCACGCTC GCCGCCGTCG GCATGTTCGG CAATCATGGC CTCTGGTTCG CGCTGCTGCT GTTCATGGCG GCGCGCGGCG CGACGCTCGC ACGCTACCTG CCGGCGCTGT TGCAGCGCGT TGGCGCCGAA CCGCAGGCCG CGCCTGCGGC CCGCGCGTGA
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Protein sequence | MSESALPLGA GSASAAVTHR RVLALAFPIV LANLTQPILG AVDTAVAGHL DGTQYLGGVA LGGLFFNFVF WGFGFLRMGT TGLVAQAHGA GDAAGIRLNL LRALIVAFAL GAAVLALQVP LLSFALSALG GSDAVRATAL AYSHARIWSA PFALANYVVL GYLLGVQRVR LALVAQVFIN AVNIGAVLLY VYGFGWGIAG IGAATATADA CGFALGAWML WRLRPRGLAP LAVRALADRV ALKRLIALNR DIFLRTLCLL GAFGWFAHLG AKQGDATLAA NALLLNFQTF MAYGLDGFAH AAEALVGAAA GARDRRAFRQ AVRVTLFWSA LGALLFALVY WAAGGWIVAR LTDQAEIRAV ALRYLPWAAI SPIVSVWGFL LDGVFIGATQ TQSLMRAMVV SLSIFVAATL AAVGMFGNHG LWFALLLFMA ARGATLARYL PALLQRVGAE PQAAPAARA
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