Gene Bcen2424_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1314 
Symbol 
ID4451059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1445137 
End bp1446516 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content71% 
IMG OID639693351 
ProductMATE efflux family protein 
Protein accessionYP_834959 
Protein GI116689336 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAT CCGCCTTACC GCTCGGGGCC GGCAGCGCGT CGGCCGCCGT CACGCATCGG 
CGCGTCCTCG CGCTCGCTTT CCCGATCGTC CTTGCGAATC TGACCCAGCC GATCCTCGGC
GCCGTCGACA CGGCCGTCGC CGGCCACCTC GACGGGACGC AATATCTCGG CGGTGTCGCG
CTCGGCGGGC TGTTCTTCAA TTTCGTGTTC TGGGGCTTCG GCTTCCTGCG GATGGGGACG
ACCGGCCTCG TCGCACAGGC GCATGGCGCC GGCGACGCCG CCGGAATCCG CCTGAACCTG
CTGCGCGCGC TGATCGTCGC GTTCGCGCTC GGCGCCGCGG TGCTGGCGCT GCAGGTGCCG
CTGCTGTCGT TCGCGCTGTC CGCGCTCGGC GGCAGCGATG CCGTCCGCGC GACGGCGCTC
GCATACAGCC ACGCACGGAT CTGGAGCGCA CCGTTCGCGC TCGCGAACTA CGTGGTGCTC
GGCTACCTGC TGGGCGTGCA GCGCGTCCGG CTCGCACTCG TCGCGCAGGT GTTCATCAAC
GCGGTGAACA TCGGCGCCGT GCTGCTCTAC GTGTACGGTT TCGGCTGGGG CATCGCCGGC
ATCGGCGCAG CGACCGCCAC CGCGGACGCG TGCGGTTTCG CGCTCGGCGC GTGGATGCTG
TGGCGGCTGC GGCCGCGCGG CCTTGCACCG CTCGCGGTAC GCGCGCTTGC CGACCGCGTC
GCGCTCAAGC GGCTGATCGC GCTCAATCGC GACATCTTCC TGCGCACGCT GTGCCTGCTC
GGCGCGTTCG GCTGGTTCGC GCATCTCGGC GCGAAACAAG GCGACGCGAC GCTCGCCGCG
AATGCGCTAC TGCTGAATTT CCAGACCTTC ATGGCGTACG GCCTCGACGG CTTCGCGCAT
GCGGCCGAGG CGCTCGTCGG CGCGGCGGCC GGCGCGCGCG ATCGCCGCGC CTTCCGGCAA
GCCGTGCGCG TCACGCTGTT CTGGTCGGCA CTCGGCGCGC TGCTGTTCGC GCTCGTTTAC
TGGGCGGCGG GCGGCTGGAT CGTTGCGCGC CTGACCGACC AGGCCGAGAT CCGCGCCGTC
GCGCTGCGCT ACCTGCCGTG GGCCGCGATC TCGCCGATCG TGTCGGTCTG GGGTTTCCTG
CTCGACGGCG TGTTCATCGG CGCTACGCAG ACGCAATCGC TGATGCGCGC GATGGTCGTG
TCGTTGTCGA TCTTCGTCGC GGCCACGCTC GCCGCCGTCG GCATGTTCGG CAATCATGGC
CTCTGGTTCG CGCTGCTGCT GTTCATGGCG GCGCGCGGCG CGACGCTCGC ACGCTACCTG
CCGGCGCTGT TGCAGCGCGT TGGCGCCGAA CCGCAGGCCG CGCCTGCGGC CCGCGCGTGA
 
Protein sequence
MSESALPLGA GSASAAVTHR RVLALAFPIV LANLTQPILG AVDTAVAGHL DGTQYLGGVA 
LGGLFFNFVF WGFGFLRMGT TGLVAQAHGA GDAAGIRLNL LRALIVAFAL GAAVLALQVP
LLSFALSALG GSDAVRATAL AYSHARIWSA PFALANYVVL GYLLGVQRVR LALVAQVFIN
AVNIGAVLLY VYGFGWGIAG IGAATATADA CGFALGAWML WRLRPRGLAP LAVRALADRV
ALKRLIALNR DIFLRTLCLL GAFGWFAHLG AKQGDATLAA NALLLNFQTF MAYGLDGFAH
AAEALVGAAA GARDRRAFRQ AVRVTLFWSA LGALLFALVY WAAGGWIVAR LTDQAEIRAV
ALRYLPWAAI SPIVSVWGFL LDGVFIGATQ TQSLMRAMVV SLSIFVAATL AAVGMFGNHG
LWFALLLFMA ARGATLARYL PALLQRVGAE PQAAPAARA