Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1297 |
Symbol | |
ID | 4450989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1426613 |
End bp | 1428508 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639693333 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_834942 |
Protein GI | 116689319 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.17526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAACA ATATGTTTTC GAAGGCAGCG GTGTGGCTGG TGATCGCACT GGTGCTGTTT ACGGTGTTCA AGCAGTTCGA CAAGCCCCGC GTCCAGGAAG GCGTGTCCTA TTCGCAGTTC ATGGACGACG CCAAGAACGG CAAGGTCAAG AACGTCATCG TTCAGGGGCG CAACCTCACC GTCACTCCGG CTGATGGCCA GAAATACCAG ATCGTGTCGC CCGGCGACAT CTGGATGGTC GGCGATCTGA TGAAGTACGG CGTGCAGGTC AGCGGCAAGG CCGACGACGA GCCGAACGCG CTGATGTCCG CGCTGTACTA TCTCGGGCCG ACGATCCTGA TCATCGTGTT CTGGTTCTAC ATGATGAGGC AGATGCAGGG AGGCGGCAAA GGCGGCGCAT TCTCGTTCGG GAAATCGCGT GCGCGGCTGA TCGACGAGAA CAACAACGCG GTGAACTTCT CCGACGTCGC GGGCTGCGAC GAAGCGAAGG AAGAAGTGTC CGAGCTCGTC GACTTCCTGC GCGATCCGCA GAAATTCCAG AAGCTGGGCG GCCGCATTCC GCGCGGCGTG CTGCTGGTCG GCCCGCCGGG TACCGGCAAG ACGCTGCTCG CCCGCGCGAT CGCGGGTGAA GCGAAGGTGC CGTTCTTCAG CATCTCGGGT TCGGACTTCG TCGAAATGTT CGTCGGCGTC GGCGCGGCCC GTGTGCGCGA CATGTTCGAG CAGGCGAAGA AGCATGCACC GTGCATCGTG TTCATCGACG AAATCGACGC GGTCGGCCGT CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGCG AACAGACGCT GAACCAGATG CTCGTCGAGA TGGACGGCTT CGAGGCGAAT TCAGGCGTCA TCGTGATCGC CGCGACCAAC CGTTCCGACG TGCTCGACAA GGCGCTGCTG CGTCCGGGCC GTTTCGACCG CCAGGTCTAT GTCGGCCTGC CGGACATCCG CGGCCGCGAG CAGATCATGC GCGTGCACCT GCGCAAGGTG CCGATCGCGA ACGACGTCGA CGCGGCGGTC ATCGCACGCG GCACGCCAGG CTTTTCGGGC GCCGATCTCG CGAACCTCGT GAACGAGGCT GCGCTGTTCG CCGCCCGTCG CGGCAAGCGT ATCGTCGAGA TGCAGGATTT CGAGGACGCG AAGGACAAGA TCTTCATGGG TCCGGAGCGC AAGTCGGCCG TGATCCGCGA GGAAGCGAAG CGCGCCACCG CTTATCACGA GTCGGGCCAC GCGGTGATCG CGAAGCTGTT GCCGAAGGCC GACCCGGTGC ACAAGGTCAC GATCATCCCG CGCGGTCGCG CGCTGGGCGT CACGTGGCAG TTGCCGGAGC ATGACAACGA GACGTATTCG AAGGACTACC TGCTGGACCG CCTCGCGATC CTGTTCGGTG GCCGGGTGGC CGAAGAGCTG TTCATGAACC TGGTCAGCAC CGGCGCATCG GACGACTTCA ACAAGGCCAC GCAGACCGCG CGTGCGATGG TGGCCCGTTT CGGCATGACC GACGCACTGG GGCCGATGGT CTACGTCGAC GACGAGAACG ATGCGTCGCC GTTCGGCCGT GGCTTCACGC GTACGATCTC GGAAGCGACG CAGCAGAAGG TCGACTCGGA AATCCGCCGC GTGCTGGACG AACAGTACAA CCTCGCACGC CGCCTGCTCG AAGACAACCG CGACAAGGTC GAGGCGATGA CGGCCGCACT GATGGAGTGG GAGACGATCG ACGCCGATCA GATCAACGAC ATCATGGAAG GCCGTCCGCC GCGCTCGCCG AAGAGCTCGC CGGCTGTCGG CGGCGATTCG TCGGGCGGCG GCAGCGCCGA GGTCAAGCCC GGCAGCGCGC CGGCGCCGGC TACGCCGGCG GCATAA
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Protein sequence | MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVIVQGRNLT VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LMSALYYLGP TILIIVFWFY MMRQMQGGGK GGAFSFGKSR ARLIDENNNA VNFSDVAGCD EAKEEVSELV DFLRDPQKFQ KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN RSDVLDKALL RPGRFDRQVY VGLPDIRGRE QIMRVHLRKV PIANDVDAAV IARGTPGFSG ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREEAK RATAYHESGH AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL FMNLVSTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DENDASPFGR GFTRTISEAT QQKVDSEIRR VLDEQYNLAR RLLEDNRDKV EAMTAALMEW ETIDADQIND IMEGRPPRSP KSSPAVGGDS SGGGSAEVKP GSAPAPATPA A
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