Gene Bcen2424_1297 details

Gene Information

• Locus tag: Bcen2424_1297
• ID: 4450989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 1426613
• End bp: 1428508
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639693333
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_834942
• Protein GI: 116689319
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.17526
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACAACA ATATGTTTTC GAAGGCAGCG GTGTGGCTGG TGATCGCACT GGTGCTGTTT 
ACGGTGTTCA AGCAGTTCGA CAAGCCCCGC GTCCAGGAAG GCGTGTCCTA TTCGCAGTTC 
ATGGACGACG CCAAGAACGG CAAGGTCAAG AACGTCATCG TTCAGGGGCG CAACCTCACC 
GTCACTCCGG CTGATGGCCA GAAATACCAG ATCGTGTCGC CCGGCGACAT CTGGATGGTC 
GGCGATCTGA TGAAGTACGG CGTGCAGGTC AGCGGCAAGG CCGACGACGA GCCGAACGCG 
CTGATGTCCG CGCTGTACTA TCTCGGGCCG ACGATCCTGA TCATCGTGTT CTGGTTCTAC 
ATGATGAGGC AGATGCAGGG AGGCGGCAAA GGCGGCGCAT TCTCGTTCGG GAAATCGCGT 
GCGCGGCTGA TCGACGAGAA CAACAACGCG GTGAACTTCT CCGACGTCGC GGGCTGCGAC 
GAAGCGAAGG AAGAAGTGTC CGAGCTCGTC GACTTCCTGC GCGATCCGCA GAAATTCCAG 
AAGCTGGGCG GCCGCATTCC GCGCGGCGTG CTGCTGGTCG GCCCGCCGGG TACCGGCAAG 
ACGCTGCTCG CCCGCGCGAT CGCGGGTGAA GCGAAGGTGC CGTTCTTCAG CATCTCGGGT 
TCGGACTTCG TCGAAATGTT CGTCGGCGTC GGCGCGGCCC GTGTGCGCGA CATGTTCGAG 
CAGGCGAAGA AGCATGCACC GTGCATCGTG TTCATCGACG AAATCGACGC GGTCGGCCGT 
CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGCG AACAGACGCT GAACCAGATG 
CTCGTCGAGA TGGACGGCTT CGAGGCGAAT TCAGGCGTCA TCGTGATCGC CGCGACCAAC 
CGTTCCGACG TGCTCGACAA GGCGCTGCTG CGTCCGGGCC GTTTCGACCG CCAGGTCTAT 
GTCGGCCTGC CGGACATCCG CGGCCGCGAG CAGATCATGC GCGTGCACCT GCGCAAGGTG 
CCGATCGCGA ACGACGTCGA CGCGGCGGTC ATCGCACGCG GCACGCCAGG CTTTTCGGGC 
GCCGATCTCG CGAACCTCGT GAACGAGGCT GCGCTGTTCG CCGCCCGTCG CGGCAAGCGT 
ATCGTCGAGA TGCAGGATTT CGAGGACGCG AAGGACAAGA TCTTCATGGG TCCGGAGCGC 
AAGTCGGCCG TGATCCGCGA GGAAGCGAAG CGCGCCACCG CTTATCACGA GTCGGGCCAC 
GCGGTGATCG CGAAGCTGTT GCCGAAGGCC GACCCGGTGC ACAAGGTCAC GATCATCCCG 
CGCGGTCGCG CGCTGGGCGT CACGTGGCAG TTGCCGGAGC ATGACAACGA GACGTATTCG 
AAGGACTACC TGCTGGACCG CCTCGCGATC CTGTTCGGTG GCCGGGTGGC CGAAGAGCTG 
TTCATGAACC TGGTCAGCAC CGGCGCATCG GACGACTTCA ACAAGGCCAC GCAGACCGCG 
CGTGCGATGG TGGCCCGTTT CGGCATGACC GACGCACTGG GGCCGATGGT CTACGTCGAC 
GACGAGAACG ATGCGTCGCC GTTCGGCCGT GGCTTCACGC GTACGATCTC GGAAGCGACG 
CAGCAGAAGG TCGACTCGGA AATCCGCCGC GTGCTGGACG AACAGTACAA CCTCGCACGC 
CGCCTGCTCG AAGACAACCG CGACAAGGTC GAGGCGATGA CGGCCGCACT GATGGAGTGG 
GAGACGATCG ACGCCGATCA GATCAACGAC ATCATGGAAG GCCGTCCGCC GCGCTCGCCG 
AAGAGCTCGC CGGCTGTCGG CGGCGATTCG TCGGGCGGCG GCAGCGCCGA GGTCAAGCCC 
GGCAGCGCGC CGGCGCCGGC TACGCCGGCG GCATAA 

 

Protein sequence

MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVIVQGRNLT 
VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LMSALYYLGP TILIIVFWFY 
MMRQMQGGGK GGAFSFGKSR ARLIDENNNA VNFSDVAGCD EAKEEVSELV DFLRDPQKFQ 
KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 
QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN 
RSDVLDKALL RPGRFDRQVY VGLPDIRGRE QIMRVHLRKV PIANDVDAAV IARGTPGFSG 
ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREEAK RATAYHESGH 
AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL 
FMNLVSTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DENDASPFGR GFTRTISEAT 
QQKVDSEIRR VLDEQYNLAR RLLEDNRDKV EAMTAALMEW ETIDADQIND IMEGRPPRSP 
KSSPAVGGDS SGGGSAEVKP GSAPAPATPA A