Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1288 |
Symbol | |
ID | 4450980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1415473 |
End bp | 1417050 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639693324 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_834933 |
Protein GI | 116689310 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000451956 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTTA TATTGAGTGC GATGGTGGTG CTGCTACTCG CCGCTTGTGC GAGCCAGCCC CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA ACTACCTCCG TAAATCAGCC ACCGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CACTGCGGAC TCCGATCTCT GGGCGCGCAT TCGCCGCGGC TTCCAGATGC CCGACCTGCA GAGCGATCTG GTCGACATGC AGACGACCTG GTATACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAGCTCG AGGCGCGTCA CATGCCGACC GAGCTCGCGC TGCTGCCGTT CATCGAGTCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG AAGGCGGCCG GCATGTGGCA GTTCATGCCC GGCACCGGCC GCACGTACAA CCTGAAGCGC AACATGTGGC AGGACGAGCG CCGCGACGTG CTCGCGTCGA CGAGCGCCGC GCTCGACTAC CTGTCCCGCC TGCACGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC GTACAACTGG GGCGAAGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGCTT GCCGACCGAC TACCAGAACC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG AAGAACATCA TCGCGAGCCC GCAGCAGTAC GGCCTGGCGC TGCCGGATAT CCCGAACCAC CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC GCGAACCTGC CGCTCGACGA ATTCCGCTCG CTGAACCCGT CGTTCTCGAA GCCCGTGATC CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ACGCATCCGC GTTCGAGAAG AGCCTGAAAG CGTACAACGG CCAGCTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGT GCACGCCCGG CCGCGATCGC CGAGAAGATC GGCGTCGACG CCGATACGCT GATGTCGGTC AACAAGATTC CGGCCGGCAT GCGCCTGAAG CCGGGCTCGA CGATCGTCGT GCCGCGCGGC AATGACGACG ACGAGGACAT CAGCGCCGAC GTCGCCGAAA ACGGCGCGCT CGCGATGGAG CCGGACGTCC CCGATACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCG GCGATCGCCG GCCGCTATGG CGTGTCGGTC GGCCAGTTGA AGGCGTGGAA CCGTACGCAC CGCGATCTCG CGATGCCGGG TCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTTCGGTG CCGGCGGAAC CCGGTCCGGA GCGGATCGCG ACGTCGACGG GCGGTGCGCA CATCGAGCGC GCGAGCCTGG CGGTGGGCGG CAAGTCGCAC GGCGGCAAGC GCGGCGCCGC GAAGTCGTCG GCCCGGCCAG CGGCGAAGGC CGCGCCCGCG AAAGCCGCGC CGGCCAAGGC CGCCGCGCAC AAGGGCAAGA AGAAGTAA
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Protein sequence | MRLILSAMVV LLLAACASQP PVANNAADSQ ATSNYLRKSA TAKETVDVDK QSVGDLTTAD SDLWARIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQNLRMPNET RNYVPKLQAV KNIIASPQQY GLALPDIPNH PYFVTVTTSR DIDVAVAAKL ANLPLDEFRS LNPSFSKPVI LGATEPQILL PFDNASAFEK SLKAYNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSV NKIPAGMRLK PGSTIVVPRG NDDDEDISAD VAENGALAME PDVPDTRKML IRVRRKQSMA AIAGRYGVSV GQLKAWNRTH RDLAMPGQAL VLHVPVGRSV PAEPGPERIA TSTGGAHIER ASLAVGGKSH GGKRGAAKSS ARPAAKAAPA KAAPAKAAAH KGKKK
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