| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1278 |
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| Symbol | |
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| ID | 4450664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1407564 |
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| End bp | 1408745 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639693314 |
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| Product | PHB de-polymerase domain-containing protein |
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| Protein accession | YP_834923 |
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| Protein GI | 116689300 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0921022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAT GGCGCGCGGC GACGCGATAC GCGTTCGACG CATGGCCCGC GGCGTCGCTG
CCGCACGCCG CGTCATCGTG CTACGACGAC CTGTTCGAAC CGCTGCTCGG CCCGCAGGCC
GCGCCGCCAG GCTTCGACCT CGCGTGGCCC GCCGTCAGCG AGCAGATCGT CGCGCACACG
CCGTTTTGCG ACTTGCGGCG CTTCGCGCAC GCCGATGCGC ACCGCACGGT GCTGCTGTGC
GCGCCGCTCG TCGGGCATGC GGCCGTGATG ATGCGGGAAA CCGCCGAAAC GCTGCTCGCC
GATGGCGACG TCTGCGTGAC CGACTGGCGC AATGCGCGCG ACGTGCCGCT TGCGGCAGGC
CGTTTCGGGC TCGACGAATA CGTCGCGATG CTCGACGGTT TCGTCAGCAC CCTCCAGCAC
GACGAGCGGC CGCTGCACGT CGTCGCCGTA TGCCAGGCGA CCGTACCGGC GCTCGGCGCC
CTGGCGCTGC GCGCCGCGCG CGGCCTCGCG CCGCCCGCGA GTATCACGCT GATCGGCGGC
CCGATCGATG CCCGCCTGAA CCCGAGCGCG CTCGGCGCCG CGGCCGCCGC CCATTCGCTC
GACTGGTGCC GGCGCCACTT GATCGACATC GTGCCGCCCG GCTTCGCCGG GCATGGCCGC
CACGTGTTCC CGACCTATCT GCAACAGGGC GAGATCGCGC TCCTGTATCC GCAACGCTTC
CTGACGCTGA TCGAGACCTA CGCGCTGGCA GCTTCCCGCT TCGACATGAC CGGGCTCGCC
GACGCCCGGC GGGCACTGCG CGAATACACG GCGCTGCTCG ACATGCCGGC CGACTATTTC
CTCGACACGG TCGACGTCGT GTTTCAGCGC ATGCTGCTCG CGACCGGCGC GTGGCATGTG
GACGGCCGGC GCGTCGAACC GGCCGCGCTG CGCGATGTCG CGCTGCTGAC CGTCGAAGGT
GCCTGCGACA GGGTCACGGG CGCCGGGCAG ACGCATGCGG CGCTCGATCT GTGCAGCGGC
CTCTCGGCCG ACGAGCGCCA TCGCATCGAC GTCGACGATT GCGATCACTA CGGGCTGTTT
ACGGGGCCAC GCTGGCACGG CAACGTCCAT CCGGCGCTGC AGCGCGTGTT CGCGCTCGCG
GAAGCCGGCC GACCACGCCC GCGCCGAAAC CGGCAAACCT GA
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| Protein sequence | MRAWRAATRY AFDAWPAASL PHAASSCYDD LFEPLLGPQA APPGFDLAWP AVSEQIVAHT
PFCDLRRFAH ADAHRTVLLC APLVGHAAVM MRETAETLLA DGDVCVTDWR NARDVPLAAG
RFGLDEYVAM LDGFVSTLQH DERPLHVVAV CQATVPALGA LALRAARGLA PPASITLIGG
PIDARLNPSA LGAAAAAHSL DWCRRHLIDI VPPGFAGHGR HVFPTYLQQG EIALLYPQRF
LTLIETYALA ASRFDMTGLA DARRALREYT ALLDMPADYF LDTVDVVFQR MLLATGAWHV
DGRRVEPAAL RDVALLTVEG ACDRVTGAGQ THAALDLCSG LSADERHRID VDDCDHYGLF
TGPRWHGNVH PALQRVFALA EAGRPRPRRN RQT
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