Gene Bcen2424_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1271 
Symbol 
ID4450657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1401981 
End bp1402910 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID639693307 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_834916 
Protein GI116689293 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00826271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCG ATATTCGTCA TATCCATGAC GCCCCCGCGT TCGTCGCGAA CGCGGCGAGC 
TGGTACGAAG CGTCGGCGCG GCAACGCATC GACGGGCTGC TCGACGCGGG CAGCTTCACG
GAATTCCTCG GGCCGGCCGA GCGCGTGACG AGCCCGCACC TGCCGCTGTT CGCGCTGCCG
CAGCAGTTCG ACGACGGGAT GGTGGTCGGC CACGGCCGGC TCGATGGCAA GCCGGTGTTC
GTCGCCGCGC AGGAGGGCCG CTTCATGGGC GGCGCGTTCG GCGAAGTGCA CGGCGCGAAG
CTCACCGGGC TGCTGCGCGC CGCGCGTGAC GTCGGCAAGC CGGTGCTGAT CCTGTTCGAC
ACGGGCGGCG TGCGGTTGCA GGAAGCGAAC GCGGGCGAGC TCGCGATCGC CGAGATCATG
CGCGCGCTCG TCGACGCGCG GGCGGCCGGC GTGCCGGTGA TCGGGCTGAT CGGCGGGCGC
GCGGGCTGCT ACGGCGGCGG CGGGTTGCTC GCCGCGTGCT GTTCGGCGCT CGCGGTGTCG
GAGCAGGGGC GCATCAGCGT GTCGGGGCCT GAAGTGATCG AGACCAATCG CGGCGTCGAG
GAATTCGACT CGAAGGATCG CGCGCTGATC TGGCGCACGA TGGGCGGCAA GCATCGCCGC
TTGATCGGCG GCGCCGATCG TTACGTGGCC GATACGCCGG ACGCGTTCCG CGCGGCCGCG
CTCGACCTGA TCGGCCGCGC GCCGACGTTC GATGCGGCGA TGCTGCGTGA GGAACAGGCG
CGTCTCGAAG CACGGATCGA GCGGTTCGGC GGCTGCCGGG ATGCGCTCGA CGTGTGGCGT
GCGCTCGGGG CCGACGCGCC GGAAGCGATT CCGGGCATGT CCGACGACGA ATTCGCGAAG
CTCGCCGACC AGTTACAGGA GCAGAAATGA
 
Protein sequence
MMSDIRHIHD APAFVANAAS WYEASARQRI DGLLDAGSFT EFLGPAERVT SPHLPLFALP 
QQFDDGMVVG HGRLDGKPVF VAAQEGRFMG GAFGEVHGAK LTGLLRAARD VGKPVLILFD
TGGVRLQEAN AGELAIAEIM RALVDARAAG VPVIGLIGGR AGCYGGGGLL AACCSALAVS
EQGRISVSGP EVIETNRGVE EFDSKDRALI WRTMGGKHRR LIGGADRYVA DTPDAFRAAA
LDLIGRAPTF DAAMLREEQA RLEARIERFG GCRDALDVWR ALGADAPEAI PGMSDDEFAK
LADQLQEQK