Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1231 |
Symbol | |
ID | 4450192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1361445 |
End bp | 1362476 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639693267 |
Product | ABC transporter related |
Protein accession | YP_834876 |
Protein GI | 116689253 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.328222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCG ATTCCACTCC CATCACCCTG ACCGGCTGCG CGAAGACGTT CCGCGGTACA CGCGTGCTCG AACCGCTCGA CCTGTCGATC GGCGCCGGCG AAACGCTCGT GCTGCTCGGG CCGTCCGGCT GCGGCAAGAC GACCACGCTG CGCCTGATCG CCGGCCTCGA CACGCCGGAT GCCGGCGGCA CGATCGCATT CGGCGACGAC GACGTCACCG CACTGCCGAT CGAACGCCGG CAAGTCGGCA TGGTGTTCCA GAACTACGCG CTGTTTCCGA ACCTGACGGT GCGCGGCAAC GTCGGCTACG GGCTGAAGAT CCGCAAGACC GAGCCGCGTG CGCTGCGCGA ACGCGTCGAC GAACTGCTCG CGATGATGCG GCTCGACGCG CATGCGGACA AACCGGTCGA TCAACTGTCG GGCGGCCAGC GTCAGCGCGT CGCGCTGGCA CGCGCGCTCG CGGTGCGGCC GCGCGTGCTG CTGCTCGACG AACCGCTGAC CGCGCTCGAC GCGAAGCTGC GCGACGTGCT GCGCCGCGAC ATGAACACGC TGCTGCGCGA ACTCGGCGTG ACGACCGTCT ACGTCACGCA CGACCAGGCC GAAGCGATGG AACTCGGCGA CCGGATCGTC GTGATGGGCG CGGGCCGCAT CGAGCAGATC GGCACGCCGC GCGAGATCTA CTACCACCCT GCGAACCGCA CGGTCGCGCA GTTCATCGGC ACGCTGAACC GGCTGGCGGG CCAATGGCGC GACGGCGCGC TCGCAACGAC GGGCGGCGCG ATCGTCACGC CGCACGCGGC CGACGAATGG TTCTTCCGCC CCGAGGACGC GCAGCTCGCC GATCCCGCGC TTGCGCCGCT GCGCGGCGCG GTCGGCGCGT GTGCGTTCCT CGGTGAACGC ACACGGCTCA CGATCGAGCA TGCGGCGCCC GACGCGCTCG TGATCGACGT GCCGGGCCGC ATCGCGCTTG CGCGCGGCAC GGCGGTCGGC CTCACGATCG CGCCGGAAGG CCTGATCGCG CTCGGCGCGT AA
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Protein sequence | MKLDSTPITL TGCAKTFRGT RVLEPLDLSI GAGETLVLLG PSGCGKTTTL RLIAGLDTPD AGGTIAFGDD DVTALPIERR QVGMVFQNYA LFPNLTVRGN VGYGLKIRKT EPRALRERVD ELLAMMRLDA HADKPVDQLS GGQRQRVALA RALAVRPRVL LLDEPLTALD AKLRDVLRRD MNTLLRELGV TTVYVTHDQA EAMELGDRIV VMGAGRIEQI GTPREIYYHP ANRTVAQFIG TLNRLAGQWR DGALATTGGA IVTPHAADEW FFRPEDAQLA DPALAPLRGA VGACAFLGER TRLTIEHAAP DALVIDVPGR IALARGTAVG LTIAPEGLIA LGA
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