Gene Bcen2424_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1208 
Symbol 
ID4449526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1330709 
End bp1331482 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID639693244 
ProductABC transporter related 
Protein accessionYP_834853 
Protein GI116689230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.324459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTGC TCGAACTCGA CGACCTCTGC GTCGCCTACG ACACGCCGCA CGGCCGCCGC 
ACCGTGGTCG ACGGCCTGAG CCTCGCGCTG CCGCGCGGCG ACATCGGCTG CCTGCTCGGC
GCGTCCGGCT GCGGCAAGAC CACCGTGCTG CGCGCGATCG CCGGCTTCGA ACCCGTGCGC
ATGGGGCGCA TCGTGCTGGA CGGCACGCCG GTCGCGGCGC CGTCGCTCGA CGTGCCGCCC
GAGCGGCGGC GCATCGGCAT GATGTTCCAG GATTACGCGC TGTTTCCGCA CCTGAGCGCG
GCCGACAACG TCGCGTTCGG CCTGCGGCGC ATGCCGAAGG CCGAACGGCG CCTGCGCATC
GCGGAGATGC TCGACCTCGT CGGCCTAGCC GATTCCGGCG ACGCGTATCC GCACGAACTG
TCGGGCGGCC AGCAGCAGCG CGTCGCCCTC GCACGCGCCC TTGCACCGTC GCCGGAATTG
CTGCTGCTCG ACGAGCCGTT CTCGAATCTC GACGTCGATA CGCGCGAGCG GCTCGCGTTC
GAGCTGCGCG ACATCCTGAA GCACACGGGC CACACCGCGA TCCTCGTCAC GCACAATCAG
GCGGAAGCGT TCGCGATCGC CGACCGGATC GGCGTGATGA AGGACGGCCG GCTCGCGCAA
TGGGACACGC CGTATGCGCT GCACCATCAT CCGGCCAGCC CGTTCGTCGC GGATTTCGTG
CGCCGCGACG CGCTGGCCGA CGAGCGCGCA CGCGCGCTGG CGCGCGGCCG CTGA
 
Protein sequence
MNLLELDDLC VAYDTPHGRR TVVDGLSLAL PRGDIGCLLG ASGCGKTTVL RAIAGFEPVR 
MGRIVLDGTP VAAPSLDVPP ERRRIGMMFQ DYALFPHLSA ADNVAFGLRR MPKAERRLRI
AEMLDLVGLA DSGDAYPHEL SGGQQQRVAL ARALAPSPEL LLLDEPFSNL DVDTRERLAF
ELRDILKHTG HTAILVTHNQ AEAFAIADRI GVMKDGRLAQ WDTPYALHHH PASPFVADFV
RRDALADERA RALARGR