| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1185 |
|---|
| Symbol | |
|---|
| ID | 4448253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1302384 |
|---|
| End bp | 1303412 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639693221 |
|---|
| Product | succinylglutamate desuccinylase |
|---|
| Protein accession | YP_834830 |
|---|
| Protein GI | 116689207 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2988] Succinylglutamate desuccinylase |
|---|
| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0562239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCG CCGCGTTGCT CGACGATTTT CTGGCGTTCA CGCTCGCTGG TGACGCGCCG
GCCGAACGGG ACGGCGCCTG CGCGGGCGGC GCGGTGCGCT GGCAATGGCT CGGCGACGGG
CTGCTCGCGT TCGAACCGGC GGCGACCGAC GCCGCGGCGC GCGCGAGCGT GCTCGTGTCG
GCCGGCGTGC ATGGCGACGA GACCGCGCCG ATCGAGCTGC TGTCGATGCT CGCGCGCGAC
CTCGTGGCGG GTGCGCTGCC GCTCGCGTGC CGGCTGCTCG TCGTGCTCGG CAACGTGCCG
GCGATGCGCG CGGGCGAACG CTATCTCGAC GATGACCTGA ACCGCCTGTT CAGCGGCCGT
CACGCGCAGG TGCCCGCGAG TCGCGAAGCG CCGCGCGCCG CGCAGCTCGA AGCGGCGGCA
TCCGCGTTCT TCGGGGCGGC GCCGGCGGGC AGCGCACGCT GGCATATCGA CATGCACACG
GCGATTCGCG CATCGGTGTT CGAACAGTTC GCGCTGCTGC CGCACACGGG CACGCCGCCC
ACGCGCGCGA TGGTCGAATG GCTCGGCGAT GCACGCATCG CGGCCGTGCT GCTGCATACG
GCGAAGGGCA ACACGTATTC GCATTTCACG GCCGAGCATT GCGGCGCGCT CGCGTGCACG
CTGGAGCTCG GCAAGGTGCG TCCGTTCGGC CAGAACGACC TGACGCGCTT CGCGCCGGCC
GACCGCGCGG TGCGCAAGCT CGTGTCGGGT GGGCGGGCGG AAGGCGGCGC CACGTTGCCG
CGCGTGTTCA CCGTCATCGA CCAGATCACG AAGCAGAGCG ACGCGCTCGA GCTGTTCGTC
GCGGCCGACG TCGCGAACTT CACCGCGTTC ACGCGCGGCA CCGTGCTCGC GCAGGACGGC
GACTACCGCT ACACGGTGAA GCACGACGAG GAACGCATCG TGTTTCCGAA CCCGACCGTG
AAGCCCGGCC TGCGCGCGGG CCTGCTCGTC GTCGATACGA CGCGCGACAC GCTGGCCGCA
CTCGTCTGA
|
|---|
| Protein sequence | MPAAALLDDF LAFTLAGDAP AERDGACAGG AVRWQWLGDG LLAFEPAATD AAARASVLVS
AGVHGDETAP IELLSMLARD LVAGALPLAC RLLVVLGNVP AMRAGERYLD DDLNRLFSGR
HAQVPASREA PRAAQLEAAA SAFFGAAPAG SARWHIDMHT AIRASVFEQF ALLPHTGTPP
TRAMVEWLGD ARIAAVLLHT AKGNTYSHFT AEHCGALACT LELGKVRPFG QNDLTRFAPA
DRAVRKLVSG GRAEGGATLP RVFTVIDQIT KQSDALELFV AADVANFTAF TRGTVLAQDG
DYRYTVKHDE ERIVFPNPTV KPGLRAGLLV VDTTRDTLAA LV
|
|---|
| |