Gene Bcen2424_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1078 
Symbol 
ID4451071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp1190523 
End bp1191143 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID639693109 
Productoligoribonuclease 
Protein accessionYP_834724 
Protein GI116689101 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.783759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA CCGCCGCTTC CGCCAGCCAG CCCGCGCTCG TGCGCAACGA GTTGAACCTC 
GTCTGGCTCG ACATGGAGAT GACGGGCCTC GACCCGGATA ACGACCGCAT CATCGAGATC 
GCGGTCGTCG TGACCAATTC CACGCTCGAC ATCGCCGTCG AGGGCCCGGT GTTCGCGATC 
CACCAGAGCG ACGAGACGCT CGCGAAGATG GACGACTGGA ACAAGTCGAC GCACGGCCGC 
TCGGGCCTGA TCGACCGCGT GCGCGCATCG ACCGTGACCG AGGCGGAAGC CGCCGCGCAG 
TTGCAGGCGT TCCTCGCGCA GTACGTGTCG CCCGGCAAGT CGCCGATGTG CGGCAACTCG 
ATTTGCCAGG ACCGCCGCTT CATGGCGCGC TGGATGCCGG AATTCGAGCG ATTCTTCCAC 
TACCGTAACC TCGACGTCAG CACGCTCAAG GAGCTGTGCC GCCGCTGGCA GCCGGCCATC 
TACAAGGGTT TCCAGAAGCG GGCGATGCAC ACGGCGCTCG CGGACATCCA CGAGTCGATC 
GACGAGCTGA AGTACTACCG CGAGCATTTC CTGATTCCGG CCGCGTCGGT GTCGGCAGGC 
GAGTCCGCGC CGGCCGCCTG A
 
Protein sequence
MTDTAASASQ PALVRNELNL VWLDMEMTGL DPDNDRIIEI AVVVTNSTLD IAVEGPVFAI 
HQSDETLAKM DDWNKSTHGR SGLIDRVRAS TVTEAEAAAQ LQAFLAQYVS PGKSPMCGNS 
ICQDRRFMAR WMPEFERFFH YRNLDVSTLK ELCRRWQPAI YKGFQKRAMH TALADIHESI 
DELKYYREHF LIPAASVSAG ESAPAA