| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1070 |
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| Symbol | rimM |
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| ID | 4451063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1183911 |
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| End bp | 1184588 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639693101 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_834716 |
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| Protein GI | 116689093 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0584634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGGTC ACGATTCCGG TAATGCAAGG CGCGGGCGTG CGTCATTCGG CGCATTCGTC
CGCAAGCCGG TCGAGCGCGA CTCGGTCGCG AACGCCGGTC AGGCTGCCGA ACAAGGTAGT
CCCGAAGCGA CGCAGGCCTG GCCCGACGAT GCCGTCGAGG TCGGAGCGGT GGTCGACGCC
TACGGCCTGA AGGGCTGGGT CAAGGTGGCG ACGCATGCCG ATGCCGGTCG CGGCGGCGAC
GCGCTGCTCA ACGCGCGTCG CTGGTGGCTG GAGCGCGGTG CGGAGCGGCT TTCCGTCCGC
ATCATGCAGT CGAAGACGCA CAGCGACACT GTCGTTGCGC AACCTGCGGG CGTCAGCGAC
CGCGATGCTG CGCTGTCCAT GCGCGGTTTT CGCGTGTTCG TGCGCCGGGA AGATTTCCCG
GCACTCGCCG CGGACGAATT CTATTGGGTC GACCTGATCG GTCTCGAGGT CGTCAACGAG
CAATCGGTGG CGCTCGGGAA GGTGAGCGGG ATGATCGACA ACGGCGTGCA TTCGATCATG
CGTGTCGAGT ATCCGGCAAC CGGCAAAGAC GGTCAGCCGA CCACCGACGA GCGGTTGATT
CCGTTCGTCG GTGTCTACGT CAAAACGGTG GATCAGGCGG CGCGTCGCAT CGTCGTCGAC
TGGGAAGCCG ATTACTGA
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| Protein sequence | MAGHDSGNAR RGRASFGAFV RKPVERDSVA NAGQAAEQGS PEATQAWPDD AVEVGAVVDA
YGLKGWVKVA THADAGRGGD ALLNARRWWL ERGAERLSVR IMQSKTHSDT VVAQPAGVSD
RDAALSMRGF RVFVRREDFP ALAADEFYWV DLIGLEVVNE QSVALGKVSG MIDNGVHSIM
RVEYPATGKD GQPTTDERLI PFVGVYVKTV DQAARRIVVD WEADY
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