| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1031 |
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| Symbol | |
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| ID | 4448945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1141644 |
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| End bp | 1144595 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639693062 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_834677 |
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| Protein GI | 116689054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.52357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCG ACACGAACAA CGTCCGCCAA GGCGGCTGCG GCTCGGGCCA ATGCGCGTGC
AAGAGCGCCG CACAGGCGCG CGCATTCGAT CCGTTCGACG ACACCGACTA CGGTACGCCG
CAACGGCATG CCGACACCGA CGTCACGCTC GAAATCGACG GCCAGCCGGT CACGGTGCCG
GCCGGCACGT CGGTCATGCG CGCGGCGATC GAAGCCGGCG TCAACGTCCC GAAGCTCTGC
GCGACCGATT CGCTCGAACC GTTCGGCTCG TGCCGGCTGT GCCTCGTCGA GATCGAGGGC
CGGCGCGGCT ATCCGGCGTC GTGCACGACG CCCGCCGAAG CCGGCATGAA GGTGCGCACG
CAGTCGGACC GGCTGCAGTC GCTGCGCCGC AACGTGATGG AGCTGTACAT CTCCGACCAT
CCGCTCGACT GCCTCACCTG CCCGGCCAAC GGCGACTGCG AGCTGCAGGA TATGGCCGGC
GTGGTCGGCC TGCGCGAAGT GCGCTACGGC TTCGACGGCG CGAACCACCT GAAGGACACG
AAGGACGAAT CGAACCCGTA CTTCACGTAC GACCCGTCGA AGTGCATCGT CTGCAACCGC
TGCGTGCGCG CGTGCGAGGA AACGCAGGGC ACGTTCGCGC TGACGATCGC CGCGCGCGGC
TTCGAATCGC GCGTCGCCGC CGGCGAAAGC GAATCGTTCA TGGCGTCGGA ATGCGTGTCG
TGCGGCGCGT GCGTGGCCGC CTGCCCGACG GCCACGCTGC AGGAAAAATC CGTCGTGCAG
CTCGGGCAGG CCGAGCACTC GGTCGTCACG ACCTGCGCGT ACTGCGGCGT CGGCTGCTCG
TTCCAGGCCG AGATGAAGGG CACGCAGGTC GTGCGCATGA CGCCGCACAA GAACGGGCTC
GCGAACGAAG GCCACGCGTG CGTGAAGGGA CGCTTCGCGT GGGGCTACGC GACGCACAAG
GACCGCATCA CGAAGCCGAT GATCCGCGAG AAGATCACCG ACCCGTGGCG CGAAGTCAGC
TGGGAAGAGG CGCTCACCTA CGCGGCGACG CAGTTCCGCA AGCTGCAGCA GAAGTACGGC
CGCGATTCGA TCGGCGGCAT CACGTCGTCG CGCTGCACGA ACGAGGAAAC CTATCTCGTG
CAGAAACTCG TGCGCGCCGC GTTCGGCAAC AACAACGTCG ATACCTGCGC ACGCGTGTGC
CACTCGCCGA CCGGCTATGG CCTCAAGACG ACGCTCGGCG AATCGGCCGG CACGCAGACG
TTCGCCTCGG TCGGCCAGGC CGACGTGATC GTCGTGATGG GCGCGAACCC GACCGACGGC
CATCCGGTGT TCGGCTCGCG GCTGAAGCGG CGCGTGCGCG AAGGCGCGAA GCTGATCGTG
ATCGACCCGC GCCGCATCGA CGTCGTCGAC GGCCCGCACG TGAAGGCCAC GCACCACCTG
CAGTTGCGCC CGGGCACCAA CGTCGCGATC GTCAATGCGC TGGCGCACGT GATCGTCACC
GAAGGGCTGG TGGCCGATGC ATTCGTCGCC GAGCGCTGCG ACACGCGTGC GTTCGAGCAA
TGGCGCGACT TCGTCGCGCA GGCCGACAAT TCGCCCGAGG CGACCGCCGA CGTGACGGGC
GTGCCGGCCG AACTGGTGCG CGAGGCCGCG CGCCTCTACG CGACGGGCGG CAACGCCGCG
ATCTATTACG GCCTGGGCGT GACCGAACAC GCACAGGGCT CGACCACGGT GATGGGCATC
GCGAACCTTG CGATGGCGAC CGGCAACGTC GGCCGCGAAG GCGTCGGCGT CAATCCGCTG
CGTGGCCAGA ACAACGTGCA GGGTTCGTGC GACATGGGTT CGTTCCCGCA CGAACTGCCC
GGCTACCGGC ACATCAGCGA CACGGTCGTG CGCACGCAAT TCGAAGAAGC CTGGTCGGCC
ACGCTCCAGC CGGAGCCCGG CCTGCGCATC CCGAACATGT TCGACGCGGC GCTCGACGGC
AGCTTCAAGG GGCTCTACTG CCAGGGCGAG GACATCGTCC AGTCGGACCC GAACACGCAG
CACGTCGCGG CCGCGCTGTC GGCGATGGAA TGCATCGTCG TGCAGGACAT CTTCCTGAAC
GAAACCGCGA AATACGCGCA CGTGCTGCTG CCGGGCTCGA CGTTCCTCGA GAAGGACGGC
ACGTTCACGA ACGCGGAGCG CCGCATCTCG CGCGTGCGCA AGGTGATGCC GCCGCTCGCG
GGCTACGCGG ACTGGGAAGT GACGCTGCTG CTGTCGCAGG CGCTCGGCTA CGACATGCAC
TACACGCATC CGTCCGAAAT CATGGACGAG ATCGCACGGC TCACGCCGAC CTTCTCGGGC
GTGTCGTACG CGAAGCTCGA CGCGCTCGGC AGCATCCAGT GGCCGTGCAA CGACCACGCG
CCGGAAGGCA CGCCGACCAT GCACATCGAC ACGTTCGTGC GCGGCAAGGG CCGGTTCGTG
ATCACCAAGT TCATTCCGAC GCCGGAGAAG GTCACGCAGC GCTATCCGCT GATCCTGACG
ACGGGCCGCA TCCTGTCGCA ATACAACGTC GGCGCGCAGA CGCGCCGGAC CGAGAACGTC
CGGTGGCACG AAGAGGATCG CCTCGAGATC CATCCGCACG ACGCGGAAGA TCGCGGAATC
CGGACGGGCG ACTGGGTCGG CATCGAGTCG CGTGCCGGTC AGACGGTGTT GCGCGCGCTG
GTGTCCGAGC GCATGCAGCC GGGCGTCGTC TACACGACGT TCCACTTCCC CGAATCGGGT
GCGAACGTGA TCACGACGGA AAGCTCCGAC TGGGCGACGA ACTGCCCGGA ATACAAGGTG
ACGGCCGTTC AGGTGATGCC GGTTGCGCAA CCGTCCGACT GGCAACAAGC GTATGCGCGC
TTCAACTCGG AGCAGCTCGA CCTGCTCGAG CGCCGCGCCG CCGAGCCGGC CGCCGTGACG
ACGGGCAAGT GA
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| Protein sequence | MSLDTNNVRQ GGCGSGQCAC KSAAQARAFD PFDDTDYGTP QRHADTDVTL EIDGQPVTVP
AGTSVMRAAI EAGVNVPKLC ATDSLEPFGS CRLCLVEIEG RRGYPASCTT PAEAGMKVRT
QSDRLQSLRR NVMELYISDH PLDCLTCPAN GDCELQDMAG VVGLREVRYG FDGANHLKDT
KDESNPYFTY DPSKCIVCNR CVRACEETQG TFALTIAARG FESRVAAGES ESFMASECVS
CGACVAACPT ATLQEKSVVQ LGQAEHSVVT TCAYCGVGCS FQAEMKGTQV VRMTPHKNGL
ANEGHACVKG RFAWGYATHK DRITKPMIRE KITDPWREVS WEEALTYAAT QFRKLQQKYG
RDSIGGITSS RCTNEETYLV QKLVRAAFGN NNVDTCARVC HSPTGYGLKT TLGESAGTQT
FASVGQADVI VVMGANPTDG HPVFGSRLKR RVREGAKLIV IDPRRIDVVD GPHVKATHHL
QLRPGTNVAI VNALAHVIVT EGLVADAFVA ERCDTRAFEQ WRDFVAQADN SPEATADVTG
VPAELVREAA RLYATGGNAA IYYGLGVTEH AQGSTTVMGI ANLAMATGNV GREGVGVNPL
RGQNNVQGSC DMGSFPHELP GYRHISDTVV RTQFEEAWSA TLQPEPGLRI PNMFDAALDG
SFKGLYCQGE DIVQSDPNTQ HVAAALSAME CIVVQDIFLN ETAKYAHVLL PGSTFLEKDG
TFTNAERRIS RVRKVMPPLA GYADWEVTLL LSQALGYDMH YTHPSEIMDE IARLTPTFSG
VSYAKLDALG SIQWPCNDHA PEGTPTMHID TFVRGKGRFV ITKFIPTPEK VTQRYPLILT
TGRILSQYNV GAQTRRTENV RWHEEDRLEI HPHDAEDRGI RTGDWVGIES RAGQTVLRAL
VSERMQPGVV YTTFHFPESG ANVITTESSD WATNCPEYKV TAVQVMPVAQ PSDWQQAYAR
FNSEQLDLLE RRAAEPAAVT TGK
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