| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1006 |
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| Symbol | |
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| ID | 4448405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1113111 |
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| End bp | 1114238 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639693036 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_834652 |
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| Protein GI | 116689029 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000140116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT CTCGTCCGTC CGATCCCGCC AGCGAACAGC CGCTCGTCTT CGTCGACCTT
GAAACCACCG GCGGCTCGCT CGCCGATCAC CGCATCACCG AAATCGGCGT GGTCGAAATC
GGGCCGCTCG GCGTATCGAC GTGGACGAGC CTCGTCAATC CGGGGCAGGC GATTCCGCCG
TTCATCCAGC AACTGACTGG CATTTCGGAC GCGATGGTGC GTGACGCGCC GACGTTCGCG
TCGCTCGCGC CGGCACTGTT CGAGCGGCTC GACGGCAAGC TGTTCGTCGC GCACAACGCG
AGCTTCGACC GCGGCTTCCT GCGCGCCGAA TTCGAGCGCG CCGGGCTGGC CTTCAATCCC
GATGTGCTCT GTACGGTGCG GCTGTCGCGC GCGCTGTTTC CGCGCGAATC GCGGCATGGG
CTGGATGCGT TGATCGAACG GCATGGGCTC GTTCCGGCCG CGCGCCATCG CGCGCTGGCC
GATGCCGACC TGCTCTGGCA GTTCTGGCGC CAGTTGCACG ACATCGTGCC GCTCGAGCGG
CTGCGCGAGC AGATCGCCCG GACGACGCGC CATTTCCGTC TGGGCGGCGA TCTGACCGAG
GCCTGGCTGG ATACCGCGCC GGCAGGGTGC GGTGCGTATG CGCTGTTCGG GGAGCGTGAC
GAAGCGCTGT ATGTCGGCCG CAGTGTGCGC GTGCGGCAGC GGCTGCGTGC GCTGCTGACC
GGCGAGCGCC GCTCGTCGAA GGAAATGCGG CTCGCGCAGC AGGTGCGGCG CGTCGAATGG
CGCGAGACCG GCAACGAGCT GGGGGCGATG CTCGCCGAAG CGCAATGGAT CGCGCGGTTG
CGCCCGTCGT ACAACCGGCG CCCCGCAGCC GATGCCGTCC GCGCGGGCGG GGCGCCCTGG
CCGTTCGAAG GCGCCGTCGC GTTCGAGGCG AGCGGCGAGC GCCGCCTGTT TCACGTGATC
GATGGCTGGT GCTATCTCGG TTCGGCGGAG TCGCTCGATG CGGCCGCGCG GCTCGTGGCC
GACGCAACGG ACGGCACGTT CGAACCGTTC ACCCATCGCC TGCTGCAGAC GCATCTCGCG
CGCGGCCTGC AGGTGATTCC GCTCGTGGCG CTCACGCCGG CGGATTGA
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| Protein sequence | MSDSRPSDPA SEQPLVFVDL ETTGGSLADH RITEIGVVEI GPLGVSTWTS LVNPGQAIPP
FIQQLTGISD AMVRDAPTFA SLAPALFERL DGKLFVAHNA SFDRGFLRAE FERAGLAFNP
DVLCTVRLSR ALFPRESRHG LDALIERHGL VPAARHRALA DADLLWQFWR QLHDIVPLER
LREQIARTTR HFRLGGDLTE AWLDTAPAGC GAYALFGERD EALYVGRSVR VRQRLRALLT
GERRSSKEMR LAQQVRRVEW RETGNELGAM LAEAQWIARL RPSYNRRPAA DAVRAGGAPW
PFEGAVAFEA SGERRLFHVI DGWCYLGSAE SLDAAARLVA DATDGTFEPF THRLLQTHLA
RGLQVIPLVA LTPAD
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