| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1003 |
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| Symbol | |
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| ID | 4448402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1110452 |
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| End bp | 1111603 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639693033 |
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| Product | porin |
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| Protein accession | YP_834649 |
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| Protein GI | 116689026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000241018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCCTGATCGT CACCGCGTTG TCGGGTGTAT TCGTTACCGC AGCCCATGCT
CAAAGCAGCG TTACGCTGTA CGGCCTGATC GATGCAGGCA TCACCTACAC GAACAATCAG
GGCGGGCATA GCTCATGGTC GGAGCGCAGC GGCCAGATCA ACGGCAGCCG CTGGGGCCTG
CGCGGCACGG AAGATCTCGG CGGCGGACTG AAAGCCATCT TCGTGTTGGA GAACGGCTTC
AACATCGCCA ACGGCACGCT GGGCCAAAAT GGCCGCGAGT TCGGCCGCCA GGCGTTCGTC
GGCCTGTCGC AAGACCAGTT TGGCTCCCTC ACCCTCGGTC GCCAATACGA TAGCGTCGTC
GATTACATCG GGCCGCTGTC GCTGACCGGC ACGCAATTCG GCGGCACTCA ATTTGCCCAC
CCGTTCGACA ACGACAACCT GAACAATTCG TTCCGGATCA ATAACTCGGT CAAATATACG
AGCGTCAATT TCGGCGGCCT GAAGTTCGGC GCGTTGTACG GCTTCTCGAA CAGCAACCAG
TTCTCGAACA ACCGTGCATA CAGCGCGGGG GTGTCGTACA CCTACGCCGG CTTCAACATC
GGCGCCGGCT ACCTGCAGTT GAACAATGAC ACCTCGGGGC TCACGGCAGC TGCGGTCACC
AACAGCGCCG GCGCGGTGGC AGGCGACAAC ACGTTCGTCG GCAAGCGTCA GCGCGTGTTC
GGCGGCGGCC TGAACTACAC GTTCGGCCCC GCCACGGCCG GCTTCGTATT CACGCAAACG
CGTGTGAACC GGGCGCTCGG CATCTCCGCG GGCGCCTCGG GCGTGTCGAG CGGCCTGGGT
CTCGACGGCA CGTTCGCCCG CTTCAACAAC TACGAAGTGA ACGCGCGCTA CGCGCTCACG
CCGGCCTTGT CGCTGGCCGG GTCGTACACG TACACCGCCG GCTTCCTGGA CGGCCGTCAT
CCGGGCTGGA ATCAGTTCAA CCTGCAGACC GACTATGCGC TGTCCAAGCG GACCGACGTG
TATGTGCAAG GCGTGTATCA GCGAGTCAGC ACGGACGGCC TGGGCATCGG CGCCTATGTC
AATGGCCTCG GTGGCGCTTC GTCGACCAAC AAGCAGATCG CGGTGACCGC CGGCCTGCGC
CATCGCTTCT GA
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| Protein sequence | MKKTLIVTAL SGVFVTAAHA QSSVTLYGLI DAGITYTNNQ GGHSSWSERS GQINGSRWGL
RGTEDLGGGL KAIFVLENGF NIANGTLGQN GREFGRQAFV GLSQDQFGSL TLGRQYDSVV
DYIGPLSLTG TQFGGTQFAH PFDNDNLNNS FRINNSVKYT SVNFGGLKFG ALYGFSNSNQ
FSNNRAYSAG VSYTYAGFNI GAGYLQLNND TSGLTAAAVT NSAGAVAGDN TFVGKRQRVF
GGGLNYTFGP ATAGFVFTQT RVNRALGISA GASGVSSGLG LDGTFARFNN YEVNARYALT
PALSLAGSYT YTAGFLDGRH PGWNQFNLQT DYALSKRTDV YVQGVYQRVS TDGLGIGAYV
NGLGGASSTN KQIAVTAGLR HRF
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