Gene Bcen2424_1002 details

Gene Information

• Locus tag: Bcen2424_1002
• Symbol: greB
• ID: 4448401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 1109795
• End bp: 1110358
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639693032
• Product: transcription elongation factor GreB
• Protein accession: YP_834648
• Protein GI: 116689025
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0052225
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAGG CGTTTGTCAA AGAGTCGGAC GGTGACGACG ACGATCTCGA CCAGGCTCAA 
CCCGCGATTC CGGCGGGTGC GAAAAACTAC ATCACGCCGG CCGGCCACAA GCGGCTGCGG 
GACGAGCTGC TGAACCTGAT CGACGTCGAG CGCCCCGAGG TCGTGCGGCT CGTGTCGTGG 
GCCGCATCGA ATGGCGATCG GTCGGAGAAC GGCGACTACA TCTACGGCAA GCGGCGGCTT 
CGGGAGATCG ATCGCCGCAT CCGCTTCCTG ACGAAGCGAC TCGACCTCGC CGAAGTCGTC 
GACGCGAGCC GGCAGGAGAA TGTCGACCAG GTGTTCTTCG GCGCGACGGT CGATTACGAG 
ACGCCAGACG GCGAGGATCA CACGGTGACG ATCGTCGGGA TCGACGAGGT CGACCTCGAT 
CGCGGCTGCG TCAGCTGGAT TTCGCCCGTC GCGCGTGCGC TGATCAAGGC GAAGATCGGC 
GATACCGTCA CGCTGATGAC GCCGGCCGGC CCGCAGCCGA TCGACATACT CGACGTCCGG 
TATCCGGCGC GGGGCGACGC CTGA 

 

Protein sequence

MNKAFVKESD GDDDDLDQAQ PAIPAGAKNY ITPAGHKRLR DELLNLIDVE RPEVVRLVSW 
AASNGDRSEN GDYIYGKRRL REIDRRIRFL TKRLDLAEVV DASRQENVDQ VFFGATVDYE 
TPDGEDHTVT IVGIDEVDLD RGCVSWISPV ARALIKAKIG DTVTLMTPAG PQPIDILDVR 
YPARGDA