| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1001 |
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| Symbol | |
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| ID | 4450508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1106751 |
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| End bp | 1109117 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639693028 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_834647 |
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| Protein GI | 116689024 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CCCCATCGTC CGCCTCCGCG GATTCGACCA CCGAAGCCAC GGCCCAGTCG
CCTGCGCGCC AGTACATCGA CGCGGTCCTC GAACAGTCCT TCCGGCATCT GTTCGGGCCG
ACCGCCACAC CGGAGCAGCC GCGCAAGCAC GGCGTCGTTT CGATCGCGAA ACTGACCGCC
GCGCTTGCCG AGTATCTCGC TCCGGACGAA ATCAAAGAGG TCAAGGCGGC GTTCCACTTC
AGCGACGAAG CCCACCTCGG TCAATATCGC CAGAGCGGCG AGCCCTACAT CACCCATCCC
GTCGCCGTCG CGGAAATCTG CGCCGGCTGG AAGCTCGACG CGCAGGCCGT GATGGCCGCG
TTGCTGCACG ACGTGATGGA AGACCAGGGC GTGACCAAGA ACGAGCTGGC CGAGCGGTTC
GGCCCGAAGG TCGCCGAGCT GGTCGACGGC CTGTCGAAGC TCGACAAGAT GGAATTCCGC
AGCCGCGAGG AAGCGCAGGC GGAAAACTTC CGCAAGATGC TGCTCGCGAT GGCGCGCGAC
GTGCGCGTCA TTCTCGTCAA GCTCGCCGAT CGCTTGCACA ACATGCGCAC GCTCGGCGCG
GTGCCGATGG AAAAACGCCG CCGCGTCGCG CGGGAAACGC TCGACATCTA CGCGCCGATC
GCGCACCGGC TCGGGTTGAA CAACACGTAT CGCGAGCTGC AGGACATGAG CTTCGCGAAC
TTCAACCCGC ATCGCTACGC GACGCTCGAG AAGGCGGTGA AGGCCGCGCG CGGCAATCGC
CGCGAAGTGA TCAGCAAGAT CCTCGAGGCC GCGCAGCGCG CGATGGCCGA CGCGAAGATC
GATGCCGAGA TCACCGGCCG CGAGAAAACC ATCTACAGCG TCTATCGCAA GATGCGCGAC
AAGCAGCTGT CGTTCTCGCA GGTGCTCGAC GTGTACGGCT TCCGCGTCGT CGTCGACAGC
CCGCTCGACT GCTACACGTG CATCGGCGCG CTGCACGCGC TGTACAAGCC CGTGCCCGGC
AAGTTCAAGG ATTACATCGC GATCCCGAAG ATCAACGGCT ATCAGTCGTT GCACACGACG
CTCGTCGGCC CGTTCGGCGC GCCGATCGAG TTCCAGGTGC GTACGCGCAA GATGCACGAG
ATCGCCGAGG CGGGGGTCGC CGCGCACTGG CTGTACAAGA ACGGCAGCGC GGACCTCAGC
GACGTGCAGA AGCGCGCGCA TCAGTGGCTG AAGTCGCTGC TCGACATCCA GAGCGAAGCG
GGCGATTCGA GCGAATTCCT CGAGCACGTG AAGATCGACC TGTTCCCCGA CGCGGTCTAC
GTGTTCACGC CGAAGTCGAA GATCATGGCG CTGCCGCGTG GCGCGACGGC GCTCGATTTC
GCGTATTCGA TCCACAGCGA TCTCGGCAAC CAGTGCGTGG CCGTGAAGAT CAACAACGAA
CTGCTGCCGC TGCGCACCGA ATTGAAGAGC GGCGACATCG TCGAGGTGAT CACCGCGCCG
TATTCGAAGC CGAACCCTGC ATGGCTCGGC TTCGTGCGCA CCGGCAAGGC ACGCTCGGCG
ATCCGTCACT ACCTGAAGAC GATGCGCCTG AACGAGTCCG TGCAGCTGGG CGAGCGGCTC
GTTGACCAGA GCCTGAAGGG CTATGGTCTC GCGCTGGCCG ACGTCGAGCC GGAAGTGTGG
GAGAAGCTCG TGCAGTGGAC GGGCAACAAG AGCCGTCAGG AAATCTTCGC GGACATCGGC
CTCGGTCGTC GCGTCGCCGC GGTGATGGCC AAGCGCATCG AGGTGCTGAT GAGCGGCCGC
GACGCGGACG ACGATCTGCC GAAGTCCGAG CGGCATCCCG CGCATCATGC GCCGCCGGTC
GTGATTACCG GCACCGAAGG GATGTCCGTG CAGTTGTCCG CCTGCTGCCG GCCGATCCCG
GGCGACGCGA TCATGGGCTA CATCGGCATC GGTCTGGGCA TGGCGATTCA TACGACGGAC
TGCCGTGTCG CGCAGCGCAT CCATCGCCGC GATCCGGGCC GCTGGATCGA CGTCGAATGG
GCGCCGCAGC CGGGCCGCCT GTTCGATGTC GCGGTGAAGG CGCTGGTGAA GAACACGAAG
GGCATCTTCG CGCGCGTCGC GGCGGACATC ACGTCGGCCG ACGCGAACAT CGTTCATATC
GCGATGGACG AGGATCTGAC GCACGAATCG ACGGTGCTGC GCTTCGTGAT CCAGGTCAGC
GACCGCGTGC ATCTCGCGAA CGTGATGCGG CGCGTGAGAA CCAATCCCGA CGTGATGCGG
ATCATGCGCG AGCGCTCGAC CGACGACGGT GCGCATGCGC GCCATGACGG CGGCATGCGT
ATCGAGCGCG AGCGGCAGGA CTACTGA
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| Protein sequence | MSTTPSSASA DSTTEATAQS PARQYIDAVL EQSFRHLFGP TATPEQPRKH GVVSIAKLTA
ALAEYLAPDE IKEVKAAFHF SDEAHLGQYR QSGEPYITHP VAVAEICAGW KLDAQAVMAA
LLHDVMEDQG VTKNELAERF GPKVAELVDG LSKLDKMEFR SREEAQAENF RKMLLAMARD
VRVILVKLAD RLHNMRTLGA VPMEKRRRVA RETLDIYAPI AHRLGLNNTY RELQDMSFAN
FNPHRYATLE KAVKAARGNR REVISKILEA AQRAMADAKI DAEITGREKT IYSVYRKMRD
KQLSFSQVLD VYGFRVVVDS PLDCYTCIGA LHALYKPVPG KFKDYIAIPK INGYQSLHTT
LVGPFGAPIE FQVRTRKMHE IAEAGVAAHW LYKNGSADLS DVQKRAHQWL KSLLDIQSEA
GDSSEFLEHV KIDLFPDAVY VFTPKSKIMA LPRGATALDF AYSIHSDLGN QCVAVKINNE
LLPLRTELKS GDIVEVITAP YSKPNPAWLG FVRTGKARSA IRHYLKTMRL NESVQLGERL
VDQSLKGYGL ALADVEPEVW EKLVQWTGNK SRQEIFADIG LGRRVAAVMA KRIEVLMSGR
DADDDLPKSE RHPAHHAPPV VITGTEGMSV QLSACCRPIP GDAIMGYIGI GLGMAIHTTD
CRVAQRIHRR DPGRWIDVEW APQPGRLFDV AVKALVKNTK GIFARVAADI TSADANIVHI
AMDEDLTHES TVLRFVIQVS DRVHLANVMR RVRTNPDVMR IMRERSTDDG AHARHDGGMR
IERERQDY
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