Gene Bcen2424_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0971 
Symbol 
ID4448607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1079104 
End bp1080222 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content66% 
IMG OID639692996 
ProductABC transporter related 
Protein accessionYP_834617 
Protein GI116688994 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCC TTTCCATCCG TGACGTGTAC AAGACCTACC CGAACGGGGT GCCGGTCCTG 
AAGGGTGTCG ACATCGAGAT CGAGGACGGA CAGTTCCTGA TCCTGGTCGG CGGCTCGGGC
TGCGGGAAAT CGACGCTGCT CAACATGATC GCCGGGCTCG AGACGGTCAC GAGCGGCGAG
ATCTGCATCG ACGGCAAGGT CGTCAACGAC CTGTCGCCGA AGGATCGCGA CATCGCGATG
GTGTTTCAGT CGTACGCGCT GTATCCGTCG ATGACGGTGC GCGAGAACAT CTCGTTCGGG
CTGAACATCC GCAAGGTGCC GAAGAGCGAG CAGCAGCAGA TCGTCGACCG CGTGTCGGCG
ATGCTGCAGA TCCAGCACCT GCTCGACCGC AAGCCGGGCC AACTGTCGGG CGGCCAGCGG
CAGCGCGTCG CGATGGGCCG CGCGCTCGCA CGCGATCCGT CGCTGTTCCT GTTCGACGAA
CCGCTGTCGA ACCTCGACGC GAAGCTGCGC ATCGAGATGC GCGCGGAAAT CAAGCTGCTG
CACCAGCGTC TCGGCACGAC GATCGTCTAC GTGACGCACG ACCAGATCGA GGCGATGACG
CTCGGCGACC GGATCGCAGT GATGAAGGAC GGCGTGGTCC AGCAGTTCGG CGCGCCGCAG
GACATCTACG ATTCGCCGTC GAACCTGTTC GTCGCGGGCT TCATCGGCGC GCCGCCGATG
AACTTCATCA ACGGCAAGCT GGTCGAGCAG GGCGGCGGAA TCGCGCTCGA GATCGACACG
GGCCTCGCGC GCAGCGCGCT GATCCTGCCG TTCGACGCGG CGAAGCTGAA GTCGCACGTC
GGCCGCGAGG TGATCCTGGG CCTGCGTCCG GAGCGCATCA CCGACGCACG CAACGCGCAC
AACGGCGAGG CGTCGAACCT GCAGCCGATC GACGTGCGCG TCGACGTGAC CGAGCCGACC
GGGCCGGACA CGCACGTGTT CGCGCAGGTG AACGGCAAGC GGATCGTGAG CCGCGTGCAT
CCGGCCGCGA ACCCGCAGCC GGGGCAGACG CAGTCGCTGC TGTTCGACGT GTCGAAGGCC
GTGCTGTTCG ATCCGGCGTC GGAAGAGCGG ATCGCGTGA
 
Protein sequence
MASLSIRDVY KTYPNGVPVL KGVDIEIEDG QFLILVGGSG CGKSTLLNMI AGLETVTSGE 
ICIDGKVVND LSPKDRDIAM VFQSYALYPS MTVRENISFG LNIRKVPKSE QQQIVDRVSA
MLQIQHLLDR KPGQLSGGQR QRVAMGRALA RDPSLFLFDE PLSNLDAKLR IEMRAEIKLL
HQRLGTTIVY VTHDQIEAMT LGDRIAVMKD GVVQQFGAPQ DIYDSPSNLF VAGFIGAPPM
NFINGKLVEQ GGGIALEIDT GLARSALILP FDAAKLKSHV GREVILGLRP ERITDARNAH
NGEASNLQPI DVRVDVTEPT GPDTHVFAQV NGKRIVSRVH PAANPQPGQT QSLLFDVSKA
VLFDPASEER IA