Gene Bcen2424_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0969 
Symbol 
ID4448605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1077206 
End bp1078144 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID639692994 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_834615 
Protein GI116688992 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGCCC CTCTTAGCGG AAACGGATCC GGCGCTGCCG CCGCACGGCG TACGTCGCCG 
ATGTCGGCCT TCGCCGATCG CTGGATTCCG AAGCTCGTGC TCGCGCCGAG CGTCGCGATC
GCCGTGGTGT TCATCTACGG CTTCATCCTG ATTACCGGCT ATCTGTCGCT GACCCGCTCG
CGGCTGTTGC CCAACTACGA ATTCGACGGC TTCGGCCGTT ACACGGACCT GTTCCAGAAC
GACGTGTGGT GGACCTCCGC CGCGAACCTC GGCTGGTTCG GGATTCCGTT CATCGCGATC
TGCGTCGGCC TCGGGCTGTT CCTCGCGATC CTGCTCGACC AGCGGATCCG CAACGAAGGT
GCGCTGCGCG CGATCTTCCT GTACCCGATG GCGCTGTCGT TCATCGTCAC CGGCACCGCG
TGGCAATGGA TCCTGAACCC GGGCCTCGGC CTCGAGAAGG TGATGCACGA CTGGGGCTGG
ACGAGTTTCT CGTTCGGCTG GCTCGACGAT CCGGACAAGG CGATCTTCTG CGTGGTGATC
GCGGCCGTGT GGCAGTCGAC CGGCTTCGTG ATGGCGCTGT TCCTCGCGGG GCTGCGCGGT
GTCGACGGCG AGATCTTCAA GGCCGCGCAG GTCGACGGCG CGACGCTGCC GACCATCTAC
CGCAAGATCG TGATCCCGAG CATGCGCCCG GTGTTCTTCT CGGTGCTGCT GATCCTCTGC
CACATCACGA TCAAGACCTT CGACCTCGTC GTCGCGCTGA CTGCGGGCGG CCCGGGCACG
TCGTCGTCGT TGCCGGCCAT GTTCATGTAC ACGTTTTCGT TCAACCGCGG CCAGCTCGGG
CTCGGCGCGG CGTCCTCGGT GATGATGCTC GCGACCGTGG TCGCGGTGCT GGTGCCGCTG
ATGTATATGG AATCGAGGAG CACCCGCAAT GCAGCCTAA
 
Protein sequence
MAAPLSGNGS GAAAARRTSP MSAFADRWIP KLVLAPSVAI AVVFIYGFIL ITGYLSLTRS 
RLLPNYEFDG FGRYTDLFQN DVWWTSAANL GWFGIPFIAI CVGLGLFLAI LLDQRIRNEG
ALRAIFLYPM ALSFIVTGTA WQWILNPGLG LEKVMHDWGW TSFSFGWLDD PDKAIFCVVI
AAVWQSTGFV MALFLAGLRG VDGEIFKAAQ VDGATLPTIY RKIVIPSMRP VFFSVLLILC
HITIKTFDLV VALTAGGPGT SSSLPAMFMY TFSFNRGQLG LGAASSVMML ATVVAVLVPL
MYMESRSTRN AA