| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0933 |
|---|
| Symbol | |
|---|
| ID | 4450828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1041350 |
|---|
| End bp | 1042516 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639692958 |
|---|
| Product | mandelate racemase/muconate lactonizing enzyme |
|---|
| Protein accession | YP_834579 |
|---|
| Protein GI | 116688956 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCA CCGCGGTCCA CGAACGCGCA ATTTCCGTAT CCCGCTATGC CGATCCGGCG
ATTGCCTCCG GCGGCCTGAC TACGAGCGTC GTCGCGGTCG TCACCGACGT CGTGCGCGAC
GGCCGCCCGG TGACGGGCTA CGGCTACGCG TCGATCGGCC GCTTCGCGCA GGGCGGCCTG
ATCCGCGAAC GGTTCGCGCC GCGCTTGCTG GCCGCCGCCG ACACACTCGC CGACGAAGCC
GGCACGAACC TCGACCCATT CCGCGCCTGG CGCGCGATGA TGGCCGGCGA AAAGCCGGGC
GGGCACGGCG AACGCTGCGT CGCGGTCGGC ACGCTCGACA TGGCGATCTG GGACGCCGCC
GCGAAAATCG CCGACCTGCC GCTGCATCGC TTTCTCGCCG AGCGCCTCCA ACGCACGGCA
GCACCACGCG TGCGCGTGTA TGCGGGCGGC GGCTACCGCT ACCCGCATGA CGACCTCGCG
CGCCTGTCGG ACGAGATACG CCGGATCGTC GACCTCGGCT ACACGCACGC GAAGATCAAG
ATCGGCGGTG CGGATTTCGA TCAGGACCGG CGCCGCATCG AAGCCGCGGC CGCGCAGCTC
GCAGGCCCTT CGCATCTCGC GGTCGACGCG ATGAACACGT ACGACGCGAC GACCGTCGAC
CGGGCCGTCG ACATGCTCGC GCCGTTCGAT CTGTGGTGGT TCGAGGACAT CTGCGATCCG
CTCGACCTGC CGCTCCAGGC AGACGTCGCC GCGCGGTACG CACCGTCAAT CGCGGCAGGC
GAAGCGCTGT TCTCGCTCGC GGAGGCGAAG CTGCTCGACC GCTACGGCGG CTTGCGCCAC
GACCGCGACG TGCTGGTGTT CGATCCCGTG CACAGCTACG GGCTGCCGGG CTATCTGCAG
ATCGTCGATC ACTTCGTGTC GCGCGGCTGG CGGCGCGACG CGTTCTGGCC GCATGGGGGC
CATCTGTTCT CGTTGCATGT CGTCGCGGCG CTCGGGCTCG GCGGCGCGGA AGTCAGCCCG
TTCGCATTCG AACCCTTCAG CGGACTCGCC GATGGCGAAA TCGTCGACGC GGGATACGCG
CGCGTGCCGC AGGCGCCAGG TATCGGATTC GAGCTGCATG CCCACGCGCA CGACGCGTTC
CGCGCGATAT CGGTATCGGG CCGCTGA
|
|---|
| Protein sequence | MRITAVHERA ISVSRYADPA IASGGLTTSV VAVVTDVVRD GRPVTGYGYA SIGRFAQGGL
IRERFAPRLL AAADTLADEA GTNLDPFRAW RAMMAGEKPG GHGERCVAVG TLDMAIWDAA
AKIADLPLHR FLAERLQRTA APRVRVYAGG GYRYPHDDLA RLSDEIRRIV DLGYTHAKIK
IGGADFDQDR RRIEAAAAQL AGPSHLAVDA MNTYDATTVD RAVDMLAPFD LWWFEDICDP
LDLPLQADVA ARYAPSIAAG EALFSLAEAK LLDRYGGLRH DRDVLVFDPV HSYGLPGYLQ
IVDHFVSRGW RRDAFWPHGG HLFSLHVVAA LGLGGAEVSP FAFEPFSGLA DGEIVDAGYA
RVPQAPGIGF ELHAHAHDAF RAISVSGR
|
|---|
| |