| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0908 |
|---|
| Symbol | |
|---|
| ID | 4450855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1016899 |
|---|
| End bp | 1018086 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639692932 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_834554 |
|---|
| Protein GI | 116688931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCAT ACACCGATTC GATGTCGAAC CCGGTCGCCG ACGCGTCGAA GCCCGCTGCC
GCCGCGCGCG CGGCGGACGG CTTCGCGCTC GGCCTGCCGC CCCGCCCCGC GCTGCTGTCG
CGCCGCGCGT GGCTCGCGCT CGTCGCGCTG TGCGTGGCGA TCGGCATCGG CGTGCCGCTC
GCCGCGCTGG TTGCGCCCGA AGCCAGCGCG TTCCATCTGT CCGCGTACAC GATGACGCTC
GCCGGCAAGC TGATGTGCTA CGCGATCGCC GCGCTCGCGC TCGATCTCGT GTGGGGCTAC
TGCGGCATCC TGAGCCTCGG CCACGGCCTG TTCTTCGCGC TCGGCGGCTA TGCGATCGGC
ATGTACCTGA TGCGCGAGAT CGGCCGCGAC GGCAAGTACG GCAGCGACCT GCCCGACTTC
ATGGTGTTTC TCGACTGGCA CCAGTTGCCG TGGTACTGGA GCGGCACGCA GCATCTCGCG
TGGGCCCTCG CGCTGGTCGT GCTCGTGCCG GCCGTGCTCG CGTGGGTGTT CGGCTTCTTC
ACGTTCCGCT CGCGCGTGAA GGGCGTGTAC CTGTCGATCA TCACGCAGGC CATGACGTTC
GCCGCGATGC TGCTGTTCTA TCGCAACGAG ACGGGCTTCG GCGGCAACAA CGGCTTCACC
GATTTCAAGC GCATCGCCGG CTTCGCGATC ACGTCGCCGG GCACGCGTAC GGTGCTGTTG
CTGCTGACGT TCGCGATCCT CGTGCTCGCG TTCATCGCCG CGCGCGCGAT CGTCACGAGC
AAGCTCGGGC GCGTGGTGAC CGCGGTGCGC GACGGCGAGA CGCGGCTGAT GTTCCTCGGC
TACAGCCCGC TCGCGTACAA GCTGTTCGTG TGGACCGTGT CGGCCGTGCT GTGCGGCATC
GCCGGCGCGC TGTACGTGCC GCAGGTCGGC ATCATCAATC CCGGCGAGAT GTCGCCCGGC
AACTCGATCG AAATGGCGAT CTGGGTCGCG GTGGGCGGGC GCGGCACGCT GATCGGGCCG
ATCGTCGGCG CGTTCGCGGT GAACGGCGCG AAGAGTTTCT TCACCGCGTA CTTCGCCGAA
TACTGGCTGT TCTTCCTCGG CCTGATCTTC GTGCTCGTGC CGCTCCTGCT GCCGCGCGGG
ATCATGGGCC TCGTCGAAAC CGTGCTCGCG AAGGGGAAAC GCGCATGA
|
|---|
| Protein sequence | MTSYTDSMSN PVADASKPAA AARAADGFAL GLPPRPALLS RRAWLALVAL CVAIGIGVPL
AALVAPEASA FHLSAYTMTL AGKLMCYAIA ALALDLVWGY CGILSLGHGL FFALGGYAIG
MYLMREIGRD GKYGSDLPDF MVFLDWHQLP WYWSGTQHLA WALALVVLVP AVLAWVFGFF
TFRSRVKGVY LSIITQAMTF AAMLLFYRNE TGFGGNNGFT DFKRIAGFAI TSPGTRTVLL
LLTFAILVLA FIAARAIVTS KLGRVVTAVR DGETRLMFLG YSPLAYKLFV WTVSAVLCGI
AGALYVPQVG IINPGEMSPG NSIEMAIWVA VGGRGTLIGP IVGAFAVNGA KSFFTAYFAE
YWLFFLGLIF VLVPLLLPRG IMGLVETVLA KGKRA
|
|---|
| |