| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0906 |
|---|
| Symbol | |
|---|
| ID | 4450853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1015348 |
|---|
| End bp | 1016040 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639692930 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_834552 |
|---|
| Protein GI | 116688929 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAA TCGAAGCGCT GAACCAGTAC TACGGCGGCA GCCATATCCT GCGCAACGTG
AACCTCGTCG CCGACGACGG CAAGCTCACC GTGCTGCTCG GCCGCAACGG CGTCGGCAAG
AGCACGCTGC TGCGCTGCCT GATGGGCGTC GTCGCCGCGA AAAGCGGCAG CGTGTCGTGG
CGCGGCGCCG CGCTCGGTGC GCTGCCGCCG TATGCGCGCG TCGCGGCCGG GCTCGCGTAC
GTGCCGCAGG GCCGCGACAT CTTTCCGCGG CTCACCGTCG AGGAAAACCT GCTCGTCGGC
GCGGCGAGCC GCAAGGCGCC ATCGAAGGTA CCCGACCGTA TCTACGATCT GTTCCCGGTG
CTGAAGGACA TGCGCGCGCG GCGCGGCGGC GACCTGTCGG GCGGCCAGCA GCAGCAGCTC
GCAATCGGCC GCGCGCTGAT GAGCGAGCCG CAGTTGCTGA TCCTCGACGA GCCGACCGAG
GGCATCCAGC CGTCGATCAT CCAGGACATC GGCCGCACGC TGCGCCAGCT CGTCGACGAA
TCGAACATGA CCGTGCTGCT CGTCGAACAG TATTACGATT TCGCGCGATC GATCGCCGAT
CGCTACTGGG TGATGAGCCG CGGTGAGATC GTCGCGGGTG GTGACGCGCG GGACATGGAA
ACGAATGGCG TACGCGAACT GATCGCGGTG TGA
|
|---|
| Protein sequence | MLKIEALNQY YGGSHILRNV NLVADDGKLT VLLGRNGVGK STLLRCLMGV VAAKSGSVSW
RGAALGALPP YARVAAGLAY VPQGRDIFPR LTVEENLLVG AASRKAPSKV PDRIYDLFPV
LKDMRARRGG DLSGGQQQQL AIGRALMSEP QLLILDEPTE GIQPSIIQDI GRTLRQLVDE
SNMTVLLVEQ YYDFARSIAD RYWVMSRGEI VAGGDARDME TNGVRELIAV
|
|---|
| |