| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0900 |
|---|
| Symbol | ureC |
|---|
| ID | 4449649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 1009683 |
|---|
| End bp | 1011389 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639692924 |
|---|
| Product | urease subunit alpha |
|---|
| Protein accession | YP_834546 |
|---|
| Protein GI | 116688923 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
|---|
| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAC GCTTGAGCCG CCGCGCGTAC GCGGAAATGT TCGGGCCGAC GACGGGCGAC
CGCGTCCGGC TCGCCGATAC CGAACTGCTG ATCGAGATCG AACGCGACTT CACCACGTAC
GGCGAGGAAG TGAAGTTCGG CGGCGGGAAG GTGATCCGCG ACGGGATGGG CCAGTCGCAG
CGCGTGGCCG CCGACGTGCC CGATACCGTC ATCACGAACG CGGTGATCCT CGATCACTGG
GGCATCGTGA AGGCCGACAT CGCGATCAAG CACGGCCGCA TCGCCGCGAT CGGCAAGGCC
GGCAACCCCG ACATCCAGCC GGGCGTGACG ATCGCGATCG GCGCCGCGAC CGAAGTGATC
GCCGGCGAAG GGCTGATCGT GACCGCGGGC GGCATCGACA CGCACATCCA CTTCATCAGC
CCGCAGCAGA TCGACGAGGC GCTCGCATCG GGCGTCACGA CGATGCTCGG CGGCGGCACC
GGGCCGGCGA CCGGCACCAA CGCGACCACC TGCACGCCGG GCCCGTGGCA CATGGAGCGC
ATGCTGCAGG CCGCCGACGG CTGGCCGATC AATCTCGGCT TTCTCGGCAA GGGCAACGCG
AGCCTGCCGC AGCCGCTCGT CGAGCAGATC GCGGCCGGCG CGATCGGCCT GAAGCTGCAC
GAGGACTGGG GCACGACACC CGCCGCGATC GACAACTGCC TGTCGGTGGC CGATGACACC
GACACGCAGG TCGCGATCCA CACGGACACG CTGAACGAGG CCGGCTTCGT CGAATCGACG
GTCGCCGCGT TCAAGGGCCG CACGATCCAC ACGTACCACA CCGAAGGTGC GGGCGGCGGC
CATGCGCCCG ACATCCTGAA GGTGTGCGGC GAGATGAACG TGCTGCCGTC GTCGACCAAT
CCGACGCGCC CGTACACGAT CAACACGCTC GACGAGCATC TCGACATGCT GATGGTGTGC
CATCACCTCG ATCCGTCGAT CGCCGAGGAT CTCGCGTTCG CCGAATCGCG CATTCGTCGC
GAGACGATCG CGGCCGAGGA CATCCTGCAC GATCTCGGCG CACTGTCGAT GCTGTCGTCC
GATTCGCAGG CGATGGGCCG CGTCGGCGAA GTGATCATCC GCACCTGGCA GACCGCGCAC
AAGATGAAGG TGCAGCGCGG CGCGCTGCCG GAGGACACCG CGCGCAACGA CAACTTCCGC
GCGAAGCGCT ACGTCGCGAA GTACACGATC AACCCGGCGC TCACGCACGG CATCGCGCAC
GAAGTCGGCT CGATCGAGCC CGGCAAGTGG GCCGACCTCG TGCTGTGGGA GCCCGCGTTC
TTCGGGATCA AGCCGTCGAT GATCCTCAAG GGCGGGATGA TCGCGGTCGC GCAGATGGGC
GACCCGAACG CGTCGATTCC GACGCCGCAG CCGGTTCACT ATCGCGAGAT GTTCGCGACC
CGCGGCGGGG CGCTCGCGCG CACGTCGCTG ACCTTCGTGT CGCAGATGGC GGCCGATGCG
GGCATCGCGG AGCGCTACGG CCTCGCGAAG CGGATCGTGC CGGTGCGCAA TTGCCGCAAC
GTGACGAAGG CCGACATGAT CCACAACGCA TGGCGTCCGT CGATCAGCGT CGATCCGGAA
ACCTACGACG TGATCGCCGA CGGCCAGTTG CTCACCTGCG AACCGGCGAC GGTGCTGCCG
ATGGCGCAGC GCTATTTCCT GTTCTGA
|
|---|
| Protein sequence | MTLRLSRRAY AEMFGPTTGD RVRLADTELL IEIERDFTTY GEEVKFGGGK VIRDGMGQSQ
RVAADVPDTV ITNAVILDHW GIVKADIAIK HGRIAAIGKA GNPDIQPGVT IAIGAATEVI
AGEGLIVTAG GIDTHIHFIS PQQIDEALAS GVTTMLGGGT GPATGTNATT CTPGPWHMER
MLQAADGWPI NLGFLGKGNA SLPQPLVEQI AAGAIGLKLH EDWGTTPAAI DNCLSVADDT
DTQVAIHTDT LNEAGFVEST VAAFKGRTIH TYHTEGAGGG HAPDILKVCG EMNVLPSSTN
PTRPYTINTL DEHLDMLMVC HHLDPSIAED LAFAESRIRR ETIAAEDILH DLGALSMLSS
DSQAMGRVGE VIIRTWQTAH KMKVQRGALP EDTARNDNFR AKRYVAKYTI NPALTHGIAH
EVGSIEPGKW ADLVLWEPAF FGIKPSMILK GGMIAVAQMG DPNASIPTPQ PVHYREMFAT
RGGALARTSL TFVSQMAADA GIAERYGLAK RIVPVRNCRN VTKADMIHNA WRPSISVDPE
TYDVIADGQL LTCEPATVLP MAQRYFLF
|
|---|
| |