Gene Bcen2424_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0896 
Symbol 
ID4449645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1006300 
End bp1007661 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content73% 
IMG OID639692920 
Product3-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_834542 
Protein GI116688919 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGGG CGATCTATCG TGCGCTGTGG TGGCTCGTCG CGCCTGCCGC CGTGATCCGG 
CTCTATGTGC GCTCGCGCAA GGAGCGCGGC TATCGCGAGC ATATCGGCGA GCGCTTCGGT
CACGTCGCGG GCCGCTCGCG CGACGACCGC GCGCCGCTGA TCTGGGTGCA TGCGGTGTCG
GTCGGCGAGA CGCGCGCCGC GCAGCCGCTG ATCGATGCGC TGATGCGCGC GCGCCCCGAT
GCGCGCATCC TGCTCACGCA CATGACGCCG AGCGGCCGTG CGACGGGCGA ACAGATCTTC
GGCGATCGCG TGCTGCGCTG CTATCTGCCG TACGACATGC CGGGCGCGGT GCGGCGCTTC
CTGCGCGCGT GGCGGCCGAC GCTCGGCCTC GTGATGGAAA CCGAGGTGTG GCCGACGCTG
ATCGACGAGT GCCGGCGTGC GGACGTGCCG CTCGTGCTGA CCAATGCGCG GATGTCCGCG
CGTTCGTTCC GGCGCGCGGC GAAGTTCGGC GCGGCGACGC GCGACGTGTT CGGCGGCTTC
TCGCGCGTGC TCGCGCAGAG CCCGGCCGAC GCGGAGCGGC TGACGTCGCT CGGCGCGCGC
AACGTGACCG TGCTCGGCAA CCTGAAGTTC GACATGACGA CGCCGCCGGA ACTCGCGGCA
CGCGGCCATG CATGGCGCGA CGCGATCGGC GCGCGGCCGG TGTGGGTCGC GGCCAGCACG
CGCGAGAACG AAGAGGCGCT GGTGCTGCAG GCGTTCGCGG AAATGCGCAC GCCCGGCGCG
CTGCTGGTGC TCGTGCCGCG TCATCCGCAG CGCTTTGCCG AAGTCGAGGC GCTCGTCGCG
CGCAGCGGGC TCAAGTGCGT GCGGCGCTCG GTGTGGGCGG CCGATGCGGC TGCGCTCGCG
GCGGGCTGGC CGGCCGCCGA ACCGCTGGCG GATGACGTGA CGGTGCTGCT CGGCGATTCG
ATGGGCGAGC TCGGCGCGTA CTACGCGGCG GCCGACATCG CGTTCATCGG CGGCAGCCTG
CTGCCGCTCG GCGGGCAGAA CCTGATCGAA GCGTGCGCGG TCGGCGTGCC GGTGCTGATC
GGGCCGCACG TGTTCAACTT CACGCAGGCG ACCGCCGACG CGGTCGCGGC AGGGGCGGCG
ATGCAGGTCG AAGATCCGCT CGATCTCGCG CACGTGCTCG ACGCGCTGTT CGCCGACAAG
GCGCGGCGCA TCGCGATGGG TGCGGCCGGC GCGGCCTTCG CGGCGCGTCA TCGCGGCGCG
ACCGCGCGCA CGGTCGACGT GCTCGCCGCG CTGCTGCCGC CTGCCGCCGC CGGCGCGCGT
GCGTTGCCGG ACCAGTCGAG CGCGGCTTCC GAAGACGAAT AG
 
Protein sequence
MLRAIYRALW WLVAPAAVIR LYVRSRKERG YREHIGERFG HVAGRSRDDR APLIWVHAVS 
VGETRAAQPL IDALMRARPD ARILLTHMTP SGRATGEQIF GDRVLRCYLP YDMPGAVRRF
LRAWRPTLGL VMETEVWPTL IDECRRADVP LVLTNARMSA RSFRRAAKFG AATRDVFGGF
SRVLAQSPAD AERLTSLGAR NVTVLGNLKF DMTTPPELAA RGHAWRDAIG ARPVWVAAST
RENEEALVLQ AFAEMRTPGA LLVLVPRHPQ RFAEVEALVA RSGLKCVRRS VWAADAAALA
AGWPAAEPLA DDVTVLLGDS MGELGAYYAA ADIAFIGGSL LPLGGQNLIE ACAVGVPVLI
GPHVFNFTQA TADAVAAGAA MQVEDPLDLA HVLDALFADK ARRIAMGAAG AAFAARHRGA
TARTVDVLAA LLPPAAAGAR ALPDQSSAAS EDE