Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0892 |
Symbol | |
ID | 4449641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1001290 |
End bp | 1002546 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639692916 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_834538 |
Protein GI | 116688915 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.114426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGC GCTTCGGCAA CCCGGACGTC GCGAAGGCCG TCGCGAACCT CGTCTGGCTG GGGCTCGAAC GGCTCACGCA GATCGGCGTC GCGATCGCGA TCAGCGGCCT GCTGGCCCGT TATTTCGGGC CAGATGTGTT CGGCAAATGG CAGTATGCGA ATACGCTTCT CCTGGTACTG GCGCCGCTCA CCTGGGTGTG CGGCGCGGAA ATCCTCGTCC CCACCATCGT CCAGCGCCCG CCCGCGCAGC TCGGCGCCGT GCTCGGCAGC GCGTTCGTGC TGCGCATCGC CGTATCGGTC GCCGCGCTCG CCGCGACCTG GATCGCGATC GCCGCGGGCG CCTTCGATCC GCTGGTCGGC GCGATGCTCG CCGGCCTGGC CGTCACGATG GTGTTCCGCG AGCCGTTCGT CGGCGTGATC AACGCGTGGC TGCAGAGCAT GACCTACAGC AAGCCGCAGC TCGTCACCAG CATGCTCACC GCGCTCGCCA AGGCGCTGCT CGTCTGGCTC CTGGTGCGCG CGGCCGCCGG CCCCGCCCGT TTCGCGTGGC TGTGGGCGCT GGAAGCCGCC GCGATCGGCC TCGCGCTGCT GCTGTACTAC CGCCATCGTA ACGGCGGCGC GCTCGGCTGG ACGTTCGACA AGCCGCTGTT CCGGCACTTT GCCACGGCCG GCACCGTGTT CTGGCTCGGC CTCATCTGCA TGTACCTGTT CCTGAAGCTC GACCGCCTGA TGCTCGAGCG TCACGTTTCG TTCGCCGATC TCGGCCGCTA CTCGGCCGCG CAGCAACTCA ACGAGAACTG GATCACGCTC GCGCTGATGC TCGCGCAGAC CATCGCGCCC GCGTTCGTCT ACCGCGTGCA GGACGTCGCG CGGCTGCGCC GCAACATCGT CCGGCTGATC GCGATGACGG CCGGCCTGAT GACGGCCGGC GCGCTCGTGC TCGACGCCGC CGCCCCGCTG ATCGTAGGCA AGGTATTCGG CCGCGGCTAC GAGGCGTCCG TCGACATCTT CCGCTGGGCC GTCTGGCTGT CCGTGCCGGC CGGCATCGAG GCGATAGGCA ATCTTATCGT TCTCAAATAT CAAGCAAAAT TCGTGTTGCT GACGAAATGG CTGCTCGCGC TGGCCATCGC CGCACTCGTC AACCTGTTCG CGATCCCGCG GCTCGGCCTG TACGGCGCGC TCGTCGGGCT GGCGGCCGGC TACCTCGCCG CCGCCGCCGT CAACTTTTAT TACATCCGTT TCAAGCTGCG AACATGA
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Protein sequence | MLKRFGNPDV AKAVANLVWL GLERLTQIGV AIAISGLLAR YFGPDVFGKW QYANTLLLVL APLTWVCGAE ILVPTIVQRP PAQLGAVLGS AFVLRIAVSV AALAATWIAI AAGAFDPLVG AMLAGLAVTM VFREPFVGVI NAWLQSMTYS KPQLVTSMLT ALAKALLVWL LVRAAAGPAR FAWLWALEAA AIGLALLLYY RHRNGGALGW TFDKPLFRHF ATAGTVFWLG LICMYLFLKL DRLMLERHVS FADLGRYSAA QQLNENWITL ALMLAQTIAP AFVYRVQDVA RLRRNIVRLI AMTAGLMTAG ALVLDAAAPL IVGKVFGRGY EASVDIFRWA VWLSVPAGIE AIGNLIVLKY QAKFVLLTKW LLALAIAALV NLFAIPRLGL YGALVGLAAG YLAAAAVNFY YIRFKLRT
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