Gene Bcen2424_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0873 
Symbol 
ID4448145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp976874 
End bp977425 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID639692897 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_834519 
Protein GI116688896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCC AAGTAACGGC AACGGCGCTG CCCGAAGTCA AGATCATCGA GCCGAAGGTG 
TTCGGCGACG CGCGCGGGTT CTTCTACGAA AGCTTCAACG GGAAGGAATT CGCCGAGCAG 
GTCGCACCCG GCGTCGAATT CGTGCAGGAC AACCATTCGC GCTCGTCGAA GGGCGTGCTG 
CGCGGCCTGC ACTATCAGAT CCAGCACGCG CAGGGCAAGC TCGTTCGCGT GGTCGAGGGC 
GAAGTGTTCG ACGTCGCCGT CGACATTCGC AAGGATTCGC CCAACTTCGG CAAGTGGGTG 
GGTGTGGTGC TGTCGAACGA CAACCATCGG CAACTGTGGG TGCCGCCCGG TTTCGCGCAC 
GGGTTCGTCG TGCTGTCGGA GGCCGCGCAG TTCCTTTACA AGACGACCGA CTACTGGTTC 
CCCGAACACG AGCGCAGCAT CGTGTGGAAC GACCCGGAGA TCGGGATCGA GTGGCCGATC 
GATTTCGAGC CGCTGCTGGC GGCGAAGGAT GCGGCCGGCA AGCGTTTGAG CGAAGCCGAA 
GTTTATGCGT GA
 
Protein sequence
MAIQVTATAL PEVKIIEPKV FGDARGFFYE SFNGKEFAEQ VAPGVEFVQD NHSRSSKGVL 
RGLHYQIQHA QGKLVRVVEG EVFDVAVDIR KDSPNFGKWV GVVLSNDNHR QLWVPPGFAH 
GFVVLSEAAQ FLYKTTDYWF PEHERSIVWN DPEIGIEWPI DFEPLLAAKD AAGKRLSEAE 
VYA