Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0850 |
Symbol | |
ID | 4448005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 955573 |
End bp | 956817 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639692874 |
Product | D-amino-acid dehydrogenase |
Protein accession | YP_834496 |
Protein GI | 116688873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.173092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCG ACGTCATCGT TCTGGGGGCC GGCATCGTCG GCGTGTCGTC GGCGCTGCAT CTGCAGGATC GCGGGCTGCG CGTCGCGCTC GTCGACCGGC GCGCGCCCGG CGAGGAAACC AGCCACGGCA ATGCCGGGTT GATCGAGCGC TCGTCGGTCG TGCCGTATGC GTTTCCGCGC CGGCTCGGCA CGCTGCTGCG CTATGCGCGC AACCGCTCGG TCGATCTTTA TTGGGACTAC CGCGCGCTGC CCGCGTATGC AGGCTGGCTC GCGCGCTTCT GGCGCGAATC GTCGCCGCGG CGGCTCGCGG CCGCCGCGCG CGACCTGCTG CCGCTCGTCG CGGCGAGCGT CGTCGAGCAC GATGTGCTGC TCGCGCGCAC CGACGCGCAG CCGCTCGTGC ACGACGGCGG CTGGATCGAG GCGTTCCGTT CGCCCGCGCT GTTCGATGCG GAAGCGCGCG CGCAGCAGCG CGTGGCCGCC GCGCACGGGC TGCGGATGAC CGTGCTCGAC GCGCGTGCGC TGCGTGCGCG CGAGCCCGGT ATCGGCGACG CGTTCTGCGG CGCGTTTCAC TGGCAGGACC CGAAGACCGT GTCGAGCCCG GGCGGCCTGA CCAAGGCCTA TGCGCGGCTG TTCGAGTGCG ACGGCGGCAC GTTCGTGCGC GGCGACGCGA CGACGCTCGT GCAGGTCGAC GACGGCTGGC AGGTCCGGAC CGAACACGGG CCGATCGCGG CGCGCTCGGC CGTGGTCGCG CTCGGGCCGT GGTCCGATCA GGTGTTCGCG CCGCTCGGCT ACCGGATTCC GCTGCGCGCG AAGCGCGGGT ATCACATGCA CTACCGGCCG ACGCGCACGC CGTTGAACGT GCCCGTGTGC GATACCGAGG CAGGCTTCGT CGTCGCGCCG ATGGAGGGCG GCCGCCTGCG GCTCACGACG GGCGTCGAGA TCGCGCTGCC CGACGCGCCG CCGACCGGCG TGCAGCTCGC GCGCGCCGAA CCGCTGGCGC GTGACGCGTT CGGCATCGGC GAGCGGCTCG ACCCGGAGCC GTGGCTCGGG ATGCGGCCGT GCACGCCCGA CATGCGCCCG GTGATCGGGC CCGCGCCGCG CCACCGTCAT CTATGGTTCG CGTTCGGCCA TTGCCATCAC GGGCTCACGC TCGGGCCCGC GACTGGCCGC CTGCTCGCCG AAATGATGAC GGGTGCGCCG ACTTATATCG ATCCTCATCC GTACCGGCCT GCCCGCTTCG GCTGA
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Protein sequence | MDFDVIVLGA GIVGVSSALH LQDRGLRVAL VDRRAPGEET SHGNAGLIER SSVVPYAFPR RLGTLLRYAR NRSVDLYWDY RALPAYAGWL ARFWRESSPR RLAAAARDLL PLVAASVVEH DVLLARTDAQ PLVHDGGWIE AFRSPALFDA EARAQQRVAA AHGLRMTVLD ARALRAREPG IGDAFCGAFH WQDPKTVSSP GGLTKAYARL FECDGGTFVR GDATTLVQVD DGWQVRTEHG PIAARSAVVA LGPWSDQVFA PLGYRIPLRA KRGYHMHYRP TRTPLNVPVC DTEAGFVVAP MEGGRLRLTT GVEIALPDAP PTGVQLARAE PLARDAFGIG ERLDPEPWLG MRPCTPDMRP VIGPAPRHRH LWFAFGHCHH GLTLGPATGR LLAEMMTGAP TYIDPHPYRP ARFG
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