| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0838 |
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| Symbol | |
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| ID | 4447993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 940698 |
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| End bp | 942140 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639692862 |
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| Product | TRAP-type uncharacterized transport system periplasmic component-like protein |
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| Protein accession | YP_834484 |
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| Protein GI | 116688861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCTG CCCGCCCTCG CCCGCCGCGC CGCATCCTCG CCCGCTTCGT CGCCGTCTCG
TGGCGCGACC TCGCGCTGTC GATCGGCCCA ACCGTGCTGC TCGCCGGCGC AGCCGTCTGG
CTCGCGGTCA AGCTGATCCA GCCGGCGCCG CCGTCCACGC TCGTGATCTC GTCCGGGCCG
CCCGGCAGCA CGTACTGGAA CGCCGCGCAG AAGTACACGA CGATTCTCGC TAAAAACGGC
GTCACGCTCG ACGTTCAATC GTCCGAAGGT TCCGCGCAGA ACCTCGCGCG GCTGTCGAAT
CCGAACGCGC CGGTCGACGT CGGATTCGTG CAGAGCGGCA TCGGCCCGAA GGAGCGCGAC
GAGCATCTCG TGTCGCTCGG CAGCATCGGC TACGTGCCGC TCGCGATCAT GTACCGCGGC
CCCGTCGTCG CGCGCCTGTC CGACTTCAAG GGCAAGCGGC TCGCGCTCGG TGCGGAAGGC
AGCGGCGCGC GCGAACTGAG CCTCGCGCTG CTGAAGATGA ACGGCATCGT GCCGGGCGGC
CCGACCGCGC TCCTGCCGAC CGCCGGCGAG GACGCGGCGA CCGCGCTGCT CGACGGCAAG
ATCGACGCGG CCTTCCTGTC CGGCGATTCG ACGCAGATCC CGGTGATGGC GAAGCTGTTC
CGCGCGCCGG GCGTGCACGT GTATTCGTTC ACGCAGGCCG AGGCGTACGC GCGGCGCTTT
CCGTACCTGA CCGCGATCAC GCTGCCGATG GGCGTCTACG ATCTCGGCCT CAACCTGCCG
CCCGCCGATA TCCACACGGT CGCGCCGACG ATCGAACTCG TCGCGCGCGA CTCGCTGCAC
CCCGCGCTGT CCGACCTGCT GATCGAGGCC GCGCGCGAAG TGCACGGCCA CGCGACGATC
CTGCAGCACG CGGGCGAATT CCCGTCGCCG GTCACGCGCG GCTTCCCGCT GTCCGACGAC
GCGTCGCGCT ATTACAAGTC AGGCAAGACC TTCCTGTACC GGCGGCTGCC GTTCTGGGTC
GCGAGCCTGG TCGACCGGCT GCTGGTCGTG CTGGTACCGC TGATCGTCGT GCTGATTCCC
GGGCTGCGGC TCGTGCCGTC GCTGTACGGC TGGCGCGTGC GCTCGCGCAT CTACCGCTGG
TACGGCGCGC TGATCGCGCT CGAACGCAGC GCGCTCGGGG ACCATACGGC CGAGGAGCGC
GTGCAGTTGC TCGACCAGCT CGACGACATC GAGGAAGCCG TGAACCGGAT GAAGATGCCG
CTCGCGTACG CCGGTCAGTT CTACGTACTG CGCGAGCACA TCGGCTTCGT GCGCGAACGG
CTCACCGCGC ACGACCAGGA TGCGCCGGCG GGCCCGCCCG GCGCCGGCAG CCCGCCGGCA
CGCGCGCAAG CCGCGCCGCC ACCGGCTGGC GACGCCCCCC GGGCGACTCC CGGTTCCGCG
TGA
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| Protein sequence | MKPARPRPPR RILARFVAVS WRDLALSIGP TVLLAGAAVW LAVKLIQPAP PSTLVISSGP
PGSTYWNAAQ KYTTILAKNG VTLDVQSSEG SAQNLARLSN PNAPVDVGFV QSGIGPKERD
EHLVSLGSIG YVPLAIMYRG PVVARLSDFK GKRLALGAEG SGARELSLAL LKMNGIVPGG
PTALLPTAGE DAATALLDGK IDAAFLSGDS TQIPVMAKLF RAPGVHVYSF TQAEAYARRF
PYLTAITLPM GVYDLGLNLP PADIHTVAPT IELVARDSLH PALSDLLIEA AREVHGHATI
LQHAGEFPSP VTRGFPLSDD ASRYYKSGKT FLYRRLPFWV ASLVDRLLVV LVPLIVVLIP
GLRLVPSLYG WRVRSRIYRW YGALIALERS ALGDHTAEER VQLLDQLDDI EEAVNRMKMP
LAYAGQFYVL REHIGFVRER LTAHDQDAPA GPPGAGSPPA RAQAAPPPAG DAPRATPGSA
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