Gene Bcen2424_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0829 
Symbol 
ID4447984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp929975 
End bp930910 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content70% 
IMG OID639692853 
ProductAraC family transcriptional regulator 
Protein accessionYP_834475 
Protein GI116688852 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0210284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCT CCCTCTGCGC CCCGCCCGTC GACCGCGCCG CCGCCCTGGC CGGCGGCGAT 
CTGCCGTTCG GCCTGCAGTC GGTCTGTCGC ACGCTCGCCG ACGCGAACGC GACGCTCGAG
CGCTTCGCAT GGCTCGGCGA TCACCTCGCG ATCGCCGAAT GGACGCGGGT CACCGATGAA
AGCGAGACGG TCTACGAGCA GCCCGGCCAT CACACGCTGT CGTGCTACCT CGACGGCGGC
TATCGGACCG AGCGCCAGCG CGTGCCGCGC TACGGCGCGC CGAGCCTGCT GTGCGCGTTG
CCGGGCGACC ATGAATCACG CTGGTGGGTG CGCGGCGAAA TGCATTTCAT CCACCTCTAT
TTCCTGCCCG AGCACTTCAC GCAGCGTGCG ATCCGCGAGC TCGATCGCGA GCCGCGCGAG
CTGAAGCTCG CCGATCGCAC CTATTTCGAG GATGCACGCG TCGCGGCGCT GCTGCGCTCG
CTCGCGCTGG ATGGCTGGGA CGATGCCGAC GAGCGGCTGC GCGTGAACGA GACCGCGCAC
GAAGTGCTGA GCCTGCTGCT GCGCGGCCAG AGCACGACGC GCACCGACAC ATCGTTCCGC
GGCGGGCTGG CGCCGGCCGT GCGCCGCCGC GTGCGCGACT ACATCGACAC GTATCTCACG
CAGCCGCTGA CGCTCGGCGA ACTTGCCGAG GTCGCCGCGC TGTCCGAATA CCATTTCTCG
CGGATGTTCC GGCTGTCGTT CGGCCGCGCG CCGCACGCGT GGGTGGCCGA GCAACGGCTC
GCCCGGGCCC GCGAGCTGCT GCGCACGACG GCGCTGCCGC TCGCGCAGAT CGCGGCCGAC
TGCGGCTACG CGAACGCCGG CCACTTCAGC CATCGCTTTC GCGACGCGCA CGGCACGACG
CCGAATACGT ATCGGCGCGC GATGCAAGGC CGCTGA
 
Protein sequence
MSLSLCAPPV DRAAALAGGD LPFGLQSVCR TLADANATLE RFAWLGDHLA IAEWTRVTDE 
SETVYEQPGH HTLSCYLDGG YRTERQRVPR YGAPSLLCAL PGDHESRWWV RGEMHFIHLY
FLPEHFTQRA IRELDREPRE LKLADRTYFE DARVAALLRS LALDGWDDAD ERLRVNETAH
EVLSLLLRGQ STTRTDTSFR GGLAPAVRRR VRDYIDTYLT QPLTLGELAE VAALSEYHFS
RMFRLSFGRA PHAWVAEQRL ARARELLRTT ALPLAQIAAD CGYANAGHFS HRFRDAHGTT
PNTYRRAMQG R