| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0820 |
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| Symbol | |
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| ID | 4449888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 919540 |
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| End bp | 920874 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639692844 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_834466 |
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| Protein GI | 116688843 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.623719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTG ACCTGTCGAA ACCGGCGACC GCCGGCTACC TGAGCGGTTT CGCGAACGAA
TTCGCGACCG AGGCGCTGCC CGGTGCGCTG CCGCACGGCC GCAACTCGCC GCAGCGCGCG
CCGTACGGGC TGTACGCGGA GCAGCTGTCG GGCACCGCGT TCACCGCGCC GCGCGGCCAC
AACCGCCGCT CATGGCTGTA CCGGATTCGC CCGGCCGCCG TGCACCGGCC GTTCGAGCCG
TATGCGGGCG CGCAGCGGCT CGTGTCGGAA TTCGGCGATT CGGCCGACGT GCCGCCGACG
CCGCCGAACC AGCTGCGCTG GGACCCGCTG CCGATGCCGG TCGAGCCGAC CGATTTCGTC
GACGGTCTCG TGACGATGGC CGGCAACGGG TCGGCCGCCG CGATGAACGG CTGCGCGATC
CACCTGTACG CGGCGAACCG TTCGATGCAG GACCGCTTTT TCTACAGCGC GGACGGCGAG
CTGCTGATCG TGCCGCAGCA GGGGCGGCTG TTCATCGCGA CCGAATTCGG CCGGCTCGAC
GTCGAGCCGT TCGAGATCGC GGTGATCCCG CGCGGCGTGC GTTTTGCCGT CGCGCTGCCG
GACGGCAACG CGCGCGGCTA TATCTGCGAG AACTTCGGTG CGCTGCTGCG CCTGCCGGAT
CTCGGCCCGA TCGGCTCGAA CGGGCTCGCG AACCCGCGCG ATTTCCTGAC GCCGCAGGCC
GCGTACGAGG ATCGCGAAGG CGCGTTCGAG CTGATCGCGA AGCTGAACGG CCGGCTCTGG
CGCGCGGATA TCGGCCATTC GCCGCTCGAC GTCGTCGCGT GGCACGGCAA CTACGCACCG
TATAAGTACG ATCTGCGGCT GTTCAACACG ATCGGCTCGA TCAGCTTCGA CCATCCCGAT
CCTTCGATCT TCCTCGTGCT GCAGGCGCAG AGCGACACGC CGGGCGTCGA CACGATCGAC
TTCGTGATCT TTCCGCCGCG CTGGCTCGCG GCCGAGGATA CGTTCCGCCC GCCGTGGTTC
CACCGCAACG TCGCGAGCGA GTTCATGGGG CTCGTGCACG GCGCGTACGA CGCGAAGGCC
GAAGGCTTCG TGCCGGGCGG CGCGAGCCTG CACAACTGCA TGTCGGGCCA CGGGCCCGAT
GCGGACACGT TCGAGAAGGC GTCCGCGAGC GACACGACGA AGCCGCACAA GGTCGACGCG
ACGATGGCGT TCATGTTCGA AACCCGCACG CTGATTCGGC CGACGCGCTA CGCGCTCGAC
ACCGCGCAGC TGCAGGCCGA CTACTTCGAA TGCTGGCAAG GCATCAAGAA ACACTTCAAT
CCGGAGCAAC GATGA
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| Protein sequence | MTLDLSKPAT AGYLSGFANE FATEALPGAL PHGRNSPQRA PYGLYAEQLS GTAFTAPRGH
NRRSWLYRIR PAAVHRPFEP YAGAQRLVSE FGDSADVPPT PPNQLRWDPL PMPVEPTDFV
DGLVTMAGNG SAAAMNGCAI HLYAANRSMQ DRFFYSADGE LLIVPQQGRL FIATEFGRLD
VEPFEIAVIP RGVRFAVALP DGNARGYICE NFGALLRLPD LGPIGSNGLA NPRDFLTPQA
AYEDREGAFE LIAKLNGRLW RADIGHSPLD VVAWHGNYAP YKYDLRLFNT IGSISFDHPD
PSIFLVLQAQ SDTPGVDTID FVIFPPRWLA AEDTFRPPWF HRNVASEFMG LVHGAYDAKA
EGFVPGGASL HNCMSGHGPD ADTFEKASAS DTTKPHKVDA TMAFMFETRT LIRPTRYALD
TAQLQADYFE CWQGIKKHFN PEQR
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