| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0805 |
|---|
| Symbol | |
|---|
| ID | 4450279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 906287 |
|---|
| End bp | 907033 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639692829 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_834451 |
|---|
| Protein GI | 116688828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTGT TCGTCACAGG TGCGTCCGCC GGCTTCGGCG CCGCCATCTC CCGTGCCTTC
GTCAAGGGCG GCCATCGCGT CGTCGCCACC GCACGCCGCA AGGATCGCCT CGATGCGCTC
GCGGCCGAAC TCGGCGACGC GCTGCTGCCG TTCGAGCTCG ACGTGCGCGA CCGCGCGGCC
GTCGAAGCCG TGCCGGCCGC CCTTCCCGCC GAATTCGCGG CGCTCGACGT GCTCGTCAAC
AACGCCGGCC TCGCGCTCGG CGTCGAGCCG GCCCAGAAGG CGAGCCTCGA CGAGTGGCAG
ACCATGATCG ACACGAACTG CTCGGGCCTC GTGACCGTCA CGCACGCATT GCTGCCGGGC
ATGATCGCGC GCGGTCGCGG CCATATCTTC AATCTGGGTT CGGTGGCCGG CACCTATCCG
TATCCGGGCG GGAACGTCTA CGGCGCGACC AAGGCTTTCG TCAGACAATT CAGCCTGAAC
CTGCGCACTG ACCTGATCGG CACGCCGTTG CGCGTCACCG ACATCGAACC GGGCCTGTGC
GGCGGCACGG AATTCTCGAA CGTCCGCTTC CGCGGCGACG ATGCAAAGGC GGCGAACGTC
TACCAGAACG TCCAGCCGCT CACGGCGGAG GACATCGCCG ATACGATCTA CTGGATCGCC
ACGCGCCCCG CGCACGTCAA CATCAATACG ATCGAAATGA TGCCGGTCGC GCAAGCGCCG
GCCGGCCTCA CGATCCATCG CGGCTGA
|
|---|
| Protein sequence | MIVFVTGASA GFGAAISRAF VKGGHRVVAT ARRKDRLDAL AAELGDALLP FELDVRDRAA
VEAVPAALPA EFAALDVLVN NAGLALGVEP AQKASLDEWQ TMIDTNCSGL VTVTHALLPG
MIARGRGHIF NLGSVAGTYP YPGGNVYGAT KAFVRQFSLN LRTDLIGTPL RVTDIEPGLC
GGTEFSNVRF RGDDAKAANV YQNVQPLTAE DIADTIYWIA TRPAHVNINT IEMMPVAQAP
AGLTIHRG
|
|---|
| |