Gene Bcen2424_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0789 
Symbol 
ID4448702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp894684 
End bp895631 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content72% 
IMG OID639692812 
ProductAraC family transcriptional regulator 
Protein accessionYP_834435 
Protein GI116688812 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAT TGAGTCAACT GCTGTCGCTG GGTCGCAGCC ATGTCGAACT CGATGTGCGC 
TGTCTGCTCG ACGGCCCGTT CGCGATGCCG CACGACCCGC TGCCACCCGG CGAGGCGGCA
TTCCATCTGG TGCTGGCCGG AACCTGCCGG CTGCGTGCCG CCGCTGGGCG CACGCTGCAA
CTCGCCGAGG GCGATTTCGT GCTGCTGCCC GCAGGCGGCG GGCACGATCT GCTCGACGCA
GGGGGCGGCC GCTCGAAGCC ACTCGTGCCG TTGCGCGATT CGCGCGTCGG CGACGGCGCG
GTGCTGCCGG TCAAGTCGAA TCTCGATCCG GTCGAACCGC GCAGCGCGAG CGTGGATCTG
CTCTGCGGAC GGTTCGTCTA TGCGCGCGGC GCGGGCGAAC TGCTGATGCG TACGCTGCCG
CAGGTGTTGC ACGTCGGATT GCGCGACACC TCGGGGGCCG CGCCGCTGCA ATTGCTGACG
AGTGTGCTGC GTACCGAGGC GTCGAACGTG CAGCCGGGTG CCGGCGCGAT CGTGAATGCG
CTCGGGCAGG CGCTGCTGGC GTATGCGCTG CGCGCGTACG GTCGTGGTGC GCGCGTACCG
TCCGGCTGGC TCGCGCTCGC GGCCGATGCG CGGCTGGGCC CGTCGGTCCA CGCCGTGCTG
CAGGCGCCGG CGCAACCGTG GACCGTCGAA TCGCTCGGCG CCGCGGCGGC GATGTCGCGC
GCGACCTACG CGCGGCATTT CCGCGAGAAG GCGGGGATGA GCGTCGGCGC GTTCGTCGCG
CAGATCCGGA TGATGCATGC ATGCGCGCTG CTGCAGGACA CGCAGCGCGG ACAGGCGGAA
ATCGGCCAGG CGGTCGGCTA CCAGTCCGAG GCCGCGTTCG GCAAGGCGTT TCGCGCGGTG
CTCGGCACGA CGCCGGGGCG CTGGCGGCGC GCGCGGCGCG AAACGTGA
 
Protein sequence
MDALSQLLSL GRSHVELDVR CLLDGPFAMP HDPLPPGEAA FHLVLAGTCR LRAAAGRTLQ 
LAEGDFVLLP AGGGHDLLDA GGGRSKPLVP LRDSRVGDGA VLPVKSNLDP VEPRSASVDL
LCGRFVYARG AGELLMRTLP QVLHVGLRDT SGAAPLQLLT SVLRTEASNV QPGAGAIVNA
LGQALLAYAL RAYGRGARVP SGWLALAADA RLGPSVHAVL QAPAQPWTVE SLGAAAAMSR
ATYARHFREK AGMSVGAFVA QIRMMHACAL LQDTQRGQAE IGQAVGYQSE AAFGKAFRAV
LGTTPGRWRR ARRET