| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0709 |
|---|
| Symbol | |
|---|
| ID | 4448190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 787941 |
|---|
| End bp | 790055 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639692732 |
|---|
| Product | site-specific recombinase-like protein |
|---|
| Protein accession | YP_834355 |
|---|
| Protein GI | 116688732 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4389] Site-specific recombinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTT CCCTGACGAC CCTGATCAAG AAGTGGCGCG CGTCGCGCAA TGCCGGTCAC
CAGCTCGATG CGCTGCTCGC CAACGCCGAC GCCGACGCGT CGTACGCCGA GCGCAGCGAA
TGGCTGATCG AGCTCGCGCA CTGGCTGCGC CGCAACGGTA CGGTGCAGGA CACGCCGGCC
GAGCGCGACG CCGACACGCG CACGTATCCG GCCCATGCGC GGCTGCGCTA CCTGTTCCAC
GTGCTCGACC GCAACCCCGC GTGGAAAGCG CACGCGGCGC GCATCCTGCG CGGCATCCTG
CGCGAGTGCG ACGGCATCTC GCTGCTGTGC GACGCCGGCA TGCCGGTGCA TTCGGGCTTC
TTCGGCGCAT TGTTCGAGCG GATCGATTCG TCGCTGATCC CGCCCGCGCC GAACCGCCGC
GAGCTGTCGG CGCTGTTCAC GCTGATGTTC CCCGCGCCCG AGGACGCGAA ATGGATCGAC
GCGCTGCCCG ACGACCTGCT CGCGCGCCTC GCCGGCCTGA TCTCGTTCGA CGTCACCGAG
GAAGAGCGCC ACGAGCCCGG CTCGTTCTCG CGCGATCTGC TGGCCGCGCT GCACAACCTG
ACTTGCCAGA TCAGCTCGAC CGGCCTGTCG CAGACGGTGC GCAGCCGGCT GTCCGACGAT
GATGCGCGCA AGCCGCTCGA ATCGCAGCCG TTCTACCGCC TCACTCGCGC GATGCTCGCG
GTCGAGACCG CGCATGCGGC CGTCGAGGAC GGCGGCGACC CGAGCAAGCT GCTGCACGAG
GTGAACTACC TGCGCGTGCT GCTCGACGAA TGCCGGATCG CCGTCGACGA CGTGTTCGCG
CACCTGTACC GCAACGGCGT GTCGGTCGAC ATCGTGTTTC AGGTCGAGCG GATGCGCATG
CGCATCCTGC GCGCGGAAAC GCTGCTGAAC GCGTGGATGG CGCGCGACGA CCTGCACGGA
ATGGCGCACC TGACCGCCGA GCTGGTCGAC GCGAACCAGA ACAGCCAGAG CGTCGCGCAC
CTCGTGCGCA GCAACTTCTC GCTGTTCGCG CGCAAGCTCG TCGAGACCAA CGCGGACACC
GGCGAGCACT ACATCTCGCG CGGCCGCACC GAGTACCTGA AGATGCTGCG GATGGCCGCG
GGCGGCGGCC TCGTCACCGT CGTGACCGTG TGCGTGAAGT TCGCGATCAC GGGCGCGCAC
CTGCAGTCGA TGCTCGAAGG GCTGCTCGCG GGCATCAACT ACGCGGCCAG CTTCATGCTG
ATGCACTTCC TGCACTTCAC GCTCGCGACC AAGCAGCCCG CGATGACCGC GCCGACGCTC
GCACGCGAGC TCGACGACAC CGGCCACGAG GAAGGCGTGA AGACGTTCGT CGCGTCGGTG
ATCGCGCTGA TCCGTACGCA GGCGGCCGCG ATTTCCGGCA ACGTGCTCGT CGTGCTGCCC
GTGTGCCTGC TCGTGCAGCT GTTCGCGAGC AACGTGCTGC ACGCGAACCT GATCTCGCCG
GAGAAGGCGC ACGCGACGCT GCATTCGTTC TCGCTGCTCG GCCCGACGCC GTTCTATGCC
GCGCTCACCG GCGTGCTGCT GTGGGCGTCG AGCCTGCTCG CGGGCTGGGC CGACAACTGG
TTCGTGCTGC ACCGGGTCGG CGACGCGCTC ACGTACAACC GCCGGCTGCG CCTGACGCTC
GGCGCGACCG GTGCCGCGAA GCTCGCGCAC TTCTGCCGCT CGAACGTCGC CGGCGTGGTC
GCGAACGTCG GCCTCGGCCT GATGCTCGGC CTCGTGCCGG CGATCGTCAC CGTGTTCATG
TTCCCGTTCG AGGTGCGGCA CGTGACGCTG TCGGCCGGCT CGATCGGGAT CGCGCTCGGC
GTGCTGGGCA AGGGTGCGCT CGGCACGCCC GAGCTGTGGT GGGCCGCCGC CGGCGTGCTC
AGCATGGCGA TCCTCAACGT GCTCGTGAGC TTCGCGCTCG CGTTCACGAT GGCCGTGCGC
TCGCGCAGCC TGCGCCCGAC CAAGGTACGC GCGCTCGTCG CGGCGATCGT CCGCACGGTG
CTGTCGAACC CGCTCGCGCT GTTCTGGCCG GCGGGCAACC CCGCCGCGCG CGCCGGCCAG
CCGGGCACGC ACTGA
|
|---|
| Protein sequence | MFRSLTTLIK KWRASRNAGH QLDALLANAD ADASYAERSE WLIELAHWLR RNGTVQDTPA
ERDADTRTYP AHARLRYLFH VLDRNPAWKA HAARILRGIL RECDGISLLC DAGMPVHSGF
FGALFERIDS SLIPPAPNRR ELSALFTLMF PAPEDAKWID ALPDDLLARL AGLISFDVTE
EERHEPGSFS RDLLAALHNL TCQISSTGLS QTVRSRLSDD DARKPLESQP FYRLTRAMLA
VETAHAAVED GGDPSKLLHE VNYLRVLLDE CRIAVDDVFA HLYRNGVSVD IVFQVERMRM
RILRAETLLN AWMARDDLHG MAHLTAELVD ANQNSQSVAH LVRSNFSLFA RKLVETNADT
GEHYISRGRT EYLKMLRMAA GGGLVTVVTV CVKFAITGAH LQSMLEGLLA GINYAASFML
MHFLHFTLAT KQPAMTAPTL ARELDDTGHE EGVKTFVASV IALIRTQAAA ISGNVLVVLP
VCLLVQLFAS NVLHANLISP EKAHATLHSF SLLGPTPFYA ALTGVLLWAS SLLAGWADNW
FVLHRVGDAL TYNRRLRLTL GATGAAKLAH FCRSNVAGVV ANVGLGLMLG LVPAIVTVFM
FPFEVRHVTL SAGSIGIALG VLGKGALGTP ELWWAAAGVL SMAILNVLVS FALAFTMAVR
SRSLRPTKVR ALVAAIVRTV LSNPLALFWP AGNPAARAGQ PGTH
|
|---|
| |