Gene Bcen2424_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0705 
Symbol 
ID4448186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand- 
Start bp784930 
End bp785616 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID639692728 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_834351 
Protein GI116688728 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.179711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCC GTGCCGACCG CCTGTTCCAG ATCGCCGAGC TGTTGCGCGG GCGTCGTCTC 
ACGACCGCGC AGCAGCTGGC CGACTGGCTG TCGGTGTCGC CGCGCACGGT CTATCGCGAC 
GTGCGCGACC TGCAACTGTC AGGGGTGCCG ATCGAAGGCG AAGCCGGCAT CGGCTACCGG 
CTGAACCGCA ACGCGAGCCT GCCGCCGCTC ACGTTCACGG CCGAGGAGCT GGCGGCGCTC 
GCCACCGGCG CGCGCATGCT CGAGACCTGG GGCGGCGCGC GCTTCGCGAG CGGTGCGCGC 
TCGGCGCTCG CGAAGATCGC GTCGGCGATG CCGGCCGACA AGCGCACGGC GCTCGATCGG 
CTACCCGTGT TCGCGCCGTC GTTCCACATC GACGAGACGT TTTGCGCGAA GGTCGACGCG 
ATCCACCAGG CGATCGACAC GCGCCACATC GTCAGCTTCG ACTACCGCGA CCGGCTCGGC 
GCGCATTCGC AGCGCCGCGT GTGGCCACTC GGGCTCGTCT ACTGGGGCGG GCGCTGGACG 
ATCGGCGCGT GGTGCGAGCT GCGCGGCGAT TTCCGTACCT TCGACATCGC GCGGATGGGC 
GACATCACCG TGCACGAGCA GTTTCCGGAC ATGGAAGGCC GGCGGATCGC CGACTACATG 
CGGATTGCGG AAGCGCCGAT GCGCTGA
 
Protein sequence
MTRRADRLFQ IAELLRGRRL TTAQQLADWL SVSPRTVYRD VRDLQLSGVP IEGEAGIGYR 
LNRNASLPPL TFTAEELAAL ATGARMLETW GGARFASGAR SALAKIASAM PADKRTALDR 
LPVFAPSFHI DETFCAKVDA IHQAIDTRHI VSFDYRDRLG AHSQRRVWPL GLVYWGGRWT 
IGAWCELRGD FRTFDIARMG DITVHEQFPD MEGRRIADYM RIAEAPMR