| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0673 |
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| Symbol | |
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| ID | 4448021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 748506 |
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| End bp | 753794 |
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| Gene Length | 5289 bp |
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| Protein Length | 1762 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639692696 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_834319 |
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| Protein GI | 116688696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCACT CATTTCGATC GATATGGAGC GAGGCCGCCG GCTGCTGGGT CGCGGTTGCG
GAAACGACCC GGACGCGCGG CAAGCGCTCG GGCGGTGCAT CGGGGTCAAG TCAGCGCACC
GCCCGCAAGG CAACGCACCA CGCAGCACGC CGGTCGCCGC TTCGTGTCGC GGCGCTCGGC
GCCGCCCTGG CGGCACTGTC GGCCGGCACC GTGCACGCAT CGACCTGCGG CAACGGCGCG
GCCGTCGCGA ACGGCGGCAC CTGCGCGCTC GGCAGTTTCA GCCCGACCGT CAACAACGAT
CTCGTCGGCG CCACGACCGT GTCGGGCGGC GACCGGGTCG GCCTGACCGG CGCCTGGACG
GGCGCGACCG GCGACATGGG CTACACGCCG ATGCCGCTCG GCAACACGTC CATCATTTCG
GGCAACCCGA ATCAGCCGTT GGTCACGCTC GGCGGCAAGA CGCAAAGCGT CGGTACCCCC
GATTCGATCA CGGGCGGCCG CACGTCCGTC GCCACTTACG ACTCGTCCGC GTTCGTGTCA
TCGACCGCGG GCTCGACCGT CGTGCAGGTC TACCACGACG TGAACGACAA CCAGTACGTG
AACACGCGGA TCGGCACGGT CGCGAATTCG GGCGGCACGC TCGACGTATC GATCGGCAAC
CCCGCGAACG CACCTGCGGC AACCGGCAAC GTGATGACGA TCGCGGCCAA GCAGAGCGAT
CTCGCCTACG CGGACGGCAC CGGCTCGGCA CCCAGCGTCA TCAACTGGAA TTCGCGCAAC
CAGATCTGGT TCATCACCGG CGACTATCTC GCGAGCGGCG GCCCCGTCGG CAGCATCGAG
CTCGACGTGC CGACCTACGC AGGCACCTTC ACCGCGTTCG ACGGCAGCAC GTGGACCGTC
ACCGACGCCG CGTCGCTCGC CGCGTACAAC GACTTTCTCG TGCGCTCGGT CCGCAACGGC
GCGCTCGGCT CGCAGACCGC GTACGACACC GCGTTCGGCC AGGCCGTGAC GCTCTCCCCG
CAGACCTTCG AGTATGCGAA CGACGTATCG CCCGGCGACA AGAACGCGCT GCCCAGAAAC
TACCCGTCCG CGATGCACGG CACGGGCGCA AACGCTACGC TGCACATCGG CAAGGACGGT
CAGATCGACT TCCGCGGCTC CAACACGATC GATGAGAGCG CGGCCGTCGT CGCGGAGAAC
GGCGCGCACT TCGTCAACGA CGGGCGCCTG TCGGGCGATT TCACGCTGGT GCGCCTGCTG
AGCGGCGCGA GCGGCGTCAA CAACGGCACG ATCTCGTCCG GCTATACGGT CGGCGACAAC
GTCAACACGG GGGGCGCCAC CCCTTCCGAC AACTTCGGGC TCAACACGTA CGTCGAAGGC
AGCGGCGTGT ACGCGAACGG CGCCGGCACG ACGTTCGTCA ACAACGGCGT GATGAACGTC
GGCGCCTGGA ATCTCACCCG CAACCGGCTC GACCTGCAGA ACTACGCGGT AGCCGCCACG
GACGGCGCGC GCGCGTCGAA CGCCGGCACG ATCAACGTCG GCGTCAACGC GACGACGCTC
GACAGCCAGG TGATCGGCGG CCTTGTCGCC GGCGGCAGCT TCACGAACGA AGCCGGCGGC
ACGATCTATC TCGGCCGCGC CGCGCAGTAC GACCCCAGCT CCCCCGAAGC CGCGAACGAC
GTCGCGCTGT CCGCGCACGG GTACGGCATC CTGCTCGGCG CGTCGGGCAC CGCCAGCAAC
CTCGGCACGA TCGTGATCGG CACGCAGACG CAGAACGGTG CCGCACTGGC GAGCATCGGG
TCGACTTCCG GCACGCTGAC CAACGCGGGC GCGATCGTCG TCAACGGCGC GGCGCCCGGC
ACGCCGCTCG CCAACGTCGG CATGCTCGCG GCCGACACCG CCGCGACCGT GACCAACACG
GGCACGATCA CGCTGAACGG CGTGAACGGC ATCGGCATCA TGGTCGTCGG CACCGGCACG
AACGCGACGG CCGCGACGTC GACCGGCACG ATCGACGTGG CCGGCGGCCT CGATCCCGCG
TCGGGCACGC GCAACTACGG CGTCTGGGCC GAAGGGCCGC TCGCGAAAGC CACGCTCGAC
GGTGCGCTGA ACCTGACGGG CACCGGCGCG ATCGGCGTAC ACGCGCGTTC GGGTGCGACG
ATCGACGTCG GCGCGAACGC CGTGCCGGCC TTCATGTCCG GCACGCACCA GATCGGCTTC
TATGCATACG GCGCAGGCTC GAAAATCAAC GTCGCCGCGC AGCACCTGAG TGTCGACACC
GACGATTCGA CGCTGTTCCG CGTCGCGGGC GGCGCGGCCT ACACGGGCGC GTCGGCGGCC
GGCGCACTGA CCACTGACGT CAACGGCCAG CGGGCGCGCG GCGTGCTCGC GACCGACGCC
GGCACCACGC TGTCGACCGG CAACGCGATC TACGACGTCA ACGGCGCGAA CGGCATCGCG
ATCGCGGTCG AAGGCGGCGC GAAAGGCACG ATCGACCCGG GCACGACGAT CAACCTGAAC
GCGGCCGGCG CAACGGCGGG CATCGTCGAC GGCCAGGCGC ACGACCTCGC CGGCGCGGCT
GCCGGCGCAC CGGTCGCGAC GACGCTGACC AATCACGCCG CCGTCACGTC GTCGACCGCC
GGCGTGACCG GCTTCATCGC GCAGAACCTC GGCACGCTCG AGAACCGCAG CACGGTGTTG
CTGACCGGCG CCGGCTCGAC GGGCGTCGTG GCCGGCACGC TCGGCACGGT GAACAACGCG
TCGACGATCC GCGTCTCCAA CGGCACCGGC GCGCTCGTGC AGGGTGCGTC GGCCACGCTC
GCCAATGCGG GCTCCATCGA AGCCGACGAC GGCGTCGCGG GCGTACGCCT GACGGGCGCC
GGCGCATCGG TCGCGCTGTC GGGCGCCGGC ACCGTCATCG CGAACGGCAG CGCCGACGGC
GTGCTGATCG ACTCGACGGT CACCGGCGGC GGCATCGCGG CCGGCGCGAC GTCGATCGCG
GTCGGCGGCT CGGGCAGCGG GATCCACAAC CTCGGTGCGA ATGCAACGAT CGCGCTGTCC
GGCACGCAGG TCGCCACGAC CGGCAACGGC GCCGCCGGCC TCGCGTCGAC CGGTGCGGGT
GCACGTATCG CGACCGATGC GGCCACGGTC GTCCGCACGG CGGGGGCCGA CGCGCTCGGC
CTGTCCGTGT CGGGGGCCGA CTCCACGCTC GCAGCCAACG GAACGACCGT CGCGACGACC
GGCGCGAACG CGCATGCGAT CGTCATGGAC GGCGGCGCGA CAGCCCTGCT GTCGGGCGCG
AAGATTTCCG CATCGGGTGC CGCGGCCGAT GGCATCGTCG CGCAAAACGG CGGCCGCATC
GCCGATACGG GTTCGTCGCT CGCCAGCGTG GCCGGCAACG GCGCCACCGC GAACAGCGGC
GGCGTGCTCG CGTTGACCGG CACGGCGCTC ACGGGCGCGA CGGCCGGCGT GCTGACGTCG
GACACGCTCG CGAACGGCGC GACCAGCTCG GTGCTCGTCG ACGGCGGCAG CGTGACGTCA
TCCACCGGGC CGGCGTTCGC CGCGCGCGGC GGCACGGCCG ACATCGCGGT ACGCAACGGC
ACGGTCGTGA CGGCCGGCAA CGGCACGCTG CTGAACCTCG CGAACGGCAG CAACGTGACG
TTCAGCGCAT CGGCGGTCAA CCTCGCGGGC GACATCGTGT CGGACGCGTC GAGCACCGGC
AACGTGTTCC TCGCGAACGG CACGACGCTG ACCGGGAAGA TCGACCCGGT CGCGTTGAGC
GTCGACGGCA CGAGCACGTG GCGCATGACC GGCAGTTCGG TCCTGAGCAG CCTGAACAAC
GCGGGCCTCG TCGCATTCGC CGCGCCGACC GGCTCGCCGA CGCTGACCGG CAGCTACAAG
ACGCTGACGA CCGGCGGCTA CGTCGGCAAC GGCGGCACGC TCGCGCTGAA CACGTATCTC
GGCGCCGATA CGTCACCGAC CGACCGGCTG ATCGTGAACG GCGGCACGGC GAGCGGCACG
ACCGGCCTGA AGATCGCCAA CACGGCCGGC ACCGGCGCGC AGACGACCGG TGACGGGATT
CCCGTGGTCG TCACGGCCAA CGGCGGCACG ACCGCCGCGT CGGCATTCCA TCTTGCCGGC
CCGGTACAGG CCGGCGCGTA CGAATACCGG CTCTATCGCG GCGGGCAAGG CGATGCAAAC
GGCTGGTACC TGCGCTCTCA ACTCGACCAG ACCGATCCCG GCGACCCGAT CCACCCGTCC
GGCGGCGACG GCGGCAACAA CGGGAATGGC AACGCAAACG GCAACGGCGG CACGCTCGCG
TATCGTCCGG GCGTCTCCGG CTACGCGATG ACGCCGCTGC TGAACGTCGA CTACGGCTTC
TCGACGCTCG GCAGGCTGCA CGAGCGCGTC GGCGACATCT ACAACGTCGA GAAACAGCAG
CCCGGCAATC GCGACGGCGT GTGGGGGCGC ATCGGCGGCC AGAGCCTCGA TGCGAATGCG
GGCCGTTTCT CGGCCGACGA ACGCACGTTC TTCGCGCAGT TCGGCAAGGA CTGGACCCTC
GACCAGGCGC CGGACGGCGC CGGCCGCACG CACGCGGGCG TGACGGCCAG CATCGGCGTG
TCGAACGCGA GCTTCAGCGA CATGGCGCGC GCAGGCTCGC CCGACCTGTC GACGTCGACC
GGCTCGGTCG AGATGCACGC GCAGAGCGTC GGCGGCTACT GGACGCGCTA TCTGCCCGAC
GGCACCTACT TCGACAGCGT CGGGCAGGTC ACGCACTACG GCAACCGCTA TCGCGACAGC
TACGGCAACG AGGCGTCGCA GAACGGCTTC GGCGTCGCGC TGTCGCAGGA AGTCGGCAAG
CCGTTCGCGA TCGGCGCGTT GCCGGTCGCG GTCGAGCCGC AGGCGCAGCT GATGTATCAG
TACCTGAAGC TGAACGGGTT CAACGACAAC GTGTCGGCCG TGTCGGGCAC GACGACGAAT
GCGCTGCGCG GCCGCGTCGG CGTGCGCATC TTCCGGCCGA ACCTCCAGTC GGACGCGGGC
GGCGGCGCCG CGACGCCGTA CTTCACGGCC GACGTGCTGC ACGACTTCCT GTCGCCGGGG
CAGACCGTGG TCGGCGGCAC GCCGTTCGCG ACGCATCTCG GGCGCACCTG GTACGAGCTC
GGCGTCGGCG TGACCGCCGG CTTCGGCAAG TCGGGCGAGC TGTACGCGAA TGCGAAGATC
GCGCGCAACA TCGGCGGCGA TTACCGGCGC GGGATCGTCG GGCAGGTCGG CTACCGGTAC
AGCTGGTAA
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| Protein sequence | MNHSFRSIWS EAAGCWVAVA ETTRTRGKRS GGASGSSQRT ARKATHHAAR RSPLRVAALG
AALAALSAGT VHASTCGNGA AVANGGTCAL GSFSPTVNND LVGATTVSGG DRVGLTGAWT
GATGDMGYTP MPLGNTSIIS GNPNQPLVTL GGKTQSVGTP DSITGGRTSV ATYDSSAFVS
STAGSTVVQV YHDVNDNQYV NTRIGTVANS GGTLDVSIGN PANAPAATGN VMTIAAKQSD
LAYADGTGSA PSVINWNSRN QIWFITGDYL ASGGPVGSIE LDVPTYAGTF TAFDGSTWTV
TDAASLAAYN DFLVRSVRNG ALGSQTAYDT AFGQAVTLSP QTFEYANDVS PGDKNALPRN
YPSAMHGTGA NATLHIGKDG QIDFRGSNTI DESAAVVAEN GAHFVNDGRL SGDFTLVRLL
SGASGVNNGT ISSGYTVGDN VNTGGATPSD NFGLNTYVEG SGVYANGAGT TFVNNGVMNV
GAWNLTRNRL DLQNYAVAAT DGARASNAGT INVGVNATTL DSQVIGGLVA GGSFTNEAGG
TIYLGRAAQY DPSSPEAAND VALSAHGYGI LLGASGTASN LGTIVIGTQT QNGAALASIG
STSGTLTNAG AIVVNGAAPG TPLANVGMLA ADTAATVTNT GTITLNGVNG IGIMVVGTGT
NATAATSTGT IDVAGGLDPA SGTRNYGVWA EGPLAKATLD GALNLTGTGA IGVHARSGAT
IDVGANAVPA FMSGTHQIGF YAYGAGSKIN VAAQHLSVDT DDSTLFRVAG GAAYTGASAA
GALTTDVNGQ RARGVLATDA GTTLSTGNAI YDVNGANGIA IAVEGGAKGT IDPGTTINLN
AAGATAGIVD GQAHDLAGAA AGAPVATTLT NHAAVTSSTA GVTGFIAQNL GTLENRSTVL
LTGAGSTGVV AGTLGTVNNA STIRVSNGTG ALVQGASATL ANAGSIEADD GVAGVRLTGA
GASVALSGAG TVIANGSADG VLIDSTVTGG GIAAGATSIA VGGSGSGIHN LGANATIALS
GTQVATTGNG AAGLASTGAG ARIATDAATV VRTAGADALG LSVSGADSTL AANGTTVATT
GANAHAIVMD GGATALLSGA KISASGAAAD GIVAQNGGRI ADTGSSLASV AGNGATANSG
GVLALTGTAL TGATAGVLTS DTLANGATSS VLVDGGSVTS STGPAFAARG GTADIAVRNG
TVVTAGNGTL LNLANGSNVT FSASAVNLAG DIVSDASSTG NVFLANGTTL TGKIDPVALS
VDGTSTWRMT GSSVLSSLNN AGLVAFAAPT GSPTLTGSYK TLTTGGYVGN GGTLALNTYL
GADTSPTDRL IVNGGTASGT TGLKIANTAG TGAQTTGDGI PVVVTANGGT TAASAFHLAG
PVQAGAYEYR LYRGGQGDAN GWYLRSQLDQ TDPGDPIHPS GGDGGNNGNG NANGNGGTLA
YRPGVSGYAM TPLLNVDYGF STLGRLHERV GDIYNVEKQQ PGNRDGVWGR IGGQSLDANA
GRFSADERTF FAQFGKDWTL DQAPDGAGRT HAGVTASIGV SNASFSDMAR AGSPDLSTST
GSVEMHAQSV GGYWTRYLPD GTYFDSVGQV THYGNRYRDS YGNEASQNGF GVALSQEVGK
PFAIGALPVA VEPQAQLMYQ YLKLNGFNDN VSAVSGTTTN ALRGRVGVRI FRPNLQSDAG
GGAATPYFTA DVLHDFLSPG QTVVGGTPFA THLGRTWYEL GVGVTAGFGK SGELYANAKI
ARNIGGDYRR GIVGQVGYRY SW
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