Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0638 |
Symbol | |
ID | 4450428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 709890 |
End bp | 711962 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639692661 |
Product | transketolase |
Protein accession | YP_834284 |
Protein GI | 116688661 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0364868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGT GCCCCCGTTT CCTCGACTCG TTCTCCGGAC TCGACATGAC GACTTCGTCT CCCGCCTCCA CCACCCTGAT GGCCAACGCG ATCCGTGCGC TCGCGATGGA CGCCGTCCAG CAAGCGAACT CCGGCCACCC CGGCATGCCG ATGGGCATGG CCGAAATCGG CGTCGCACTC TGGTCGCGCC ATCTGAAGCA CAACCCGACG AACCCGCACT GGGCCGATCG CGACCGTTTC GTGCTGTCGA ACGGCCATGG CTCGATGCTG CTGTACTCGC TGCTGCATCT GACCGGCTAC GACCTGCCGA TCGAAGAGCT GAAGAATTTC CGCCAGCTGC ACTCGAAGAC GCCGGGCCAC CCCGAATACG GGATCACGCC GGGCGTCGAG ACGACCACCG GCCCGCTCGG CCAGGGTCTC GCGAACGCGG TCGGCATGGC GCTCGGCGAA GCGCTGATGG CCGACGAGTT CAACCGTGAC GGCGCGAAGA TCGTCGATCA CCACACGTAC GTGTTCCTCG GCGACGGCTG CCTGATGGAA GGCATCTCGC ACGAAGCCTG CTCGCTCGCG GGCACGCTGA AGCTGAACAA GCTGATCGCG CTGTACGACG ACAACGGCAT CTCGATCGAC GGCGACGTCG TGAACTGGTT CCACGACGAC ACGCCGAAGC GCTTCGAAGC GTACGGCTGG AACGTGATCC CGAACGTGAA CGGCCACGAC GTCGACGCGG TCGACGCGGC CATCGCGAAG GCGAAGCTGT CGGACAAACC GACGCTGATC TGCTGCAAGA CGGTGATCGG CAAGGGCGCG GCCACGAAGG CCGGCGGCCA CGACGTGCAC GGCGCGGCGC TCGGCGCGGA AGAAATCGCG AAGACGCGCG AAGCGCTCGG CTGGAAGTGG GAGCCGTTCG TGATTCCGCA GGAAGTCTAT GCGGCCTGGG ATGCGAAGGA AGCCGGCAAG CGTGCCGAGT CGGAGTGGGA CGCGACGTTC GCCGCGTATC GCGCGAAGTT CCCGGCGGAA GCCGCCGAAT TCGAGCGCCG GATGGCCAAC AAGCTGCCGG CCGACTGGGC CGAGAAGGCT GCGGCGATCA TCGCCGGCGC GAACGAGCGC GCCGAGACGG TCGCGACCCG CAAGGCGTCG CAGCAGGCGA TCGAGGGCCT CGCCGCCGCG CTGCCGGAGC TGCTCGGCGG CTCGGCCGAC CTGACCGGCT CGAACCTGAC CAACTGGAAG GCGTCGAAGG CGGTCCGCGC GAATCCGGAA GGCGCGGGCG TGCTGCTCGG CAACCACATC AACTACGGCG TGCGCGAATT CGGCATGAGC GCGGCGATCA ACGGTCTCGC GCTGCACGGC GGCCACAAGC CGTTCGGCGG CACGTTCCTG ACGTTCTCCG ACTACAGCCG CAACGCGCTG CGCGTGGCCG CGCTGATGAA GGTGCCGTCG ATCTTCGTGT TCACGCACGA TTCGATCGGC CTCGGCGAAG ACGGCCCGAC GCACCAGTCG ATCGAGCACG TGTCGAGCCT GCGCCTGATC CCGAACCACG ACGTGTGGCG TCCGGCCGAC ACGGTCGAGA CGGCCGTCGC GTGGACCCAC GCGGTCGCTG CCGACCGTCC GTCGAGTCTG ATCTTCAGCC GCCAGAACCT CGCGTTCAAC CCGCGTACCG ATGCGCAGAT CGCCAACATC GAGAAGGGCG GTTACGTGCT GAAGGACTGG GACGAGGAAA TCGTCGCACG CAAGATCATC CTGATCGCGA CGGGCTCGGA AGTCGAACTC GCGATGAAGG CCGTCGAGCC GCTCGCGCAG CAGGGCATCG CGGCGCGCGT CGTGTCGATG CCGTCGACCA ACGTGTTCGA CCGCCAGGAC GCCGAATATC GCGAACGCGT GCTGCCGCAC GGCGTGCGCC GCGTCGCGAT CGAAGCGGGC GTGACGAGCT TCTGGCACAA GTACGTCGGC CTCGAAGGCG GCGTCGTCGG GATCGACACG TTCGGCGAGT CGGCGCCGGC CGGCGTGCTG TTCAAGTACT TCGGCTTCAC CGTCGAGCAC GTCGTCGAGA CGGCCAAGGC CGTGCTGGCC TAA
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Protein sequence | MPPCPRFLDS FSGLDMTTSS PASTTLMANA IRALAMDAVQ QANSGHPGMP MGMAEIGVAL WSRHLKHNPT NPHWADRDRF VLSNGHGSML LYSLLHLTGY DLPIEELKNF RQLHSKTPGH PEYGITPGVE TTTGPLGQGL ANAVGMALGE ALMADEFNRD GAKIVDHHTY VFLGDGCLME GISHEACSLA GTLKLNKLIA LYDDNGISID GDVVNWFHDD TPKRFEAYGW NVIPNVNGHD VDAVDAAIAK AKLSDKPTLI CCKTVIGKGA ATKAGGHDVH GAALGAEEIA KTREALGWKW EPFVIPQEVY AAWDAKEAGK RAESEWDATF AAYRAKFPAE AAEFERRMAN KLPADWAEKA AAIIAGANER AETVATRKAS QQAIEGLAAA LPELLGGSAD LTGSNLTNWK ASKAVRANPE GAGVLLGNHI NYGVREFGMS AAINGLALHG GHKPFGGTFL TFSDYSRNAL RVAALMKVPS IFVFTHDSIG LGEDGPTHQS IEHVSSLRLI PNHDVWRPAD TVETAVAWTH AVAADRPSSL IFSRQNLAFN PRTDAQIANI EKGGYVLKDW DEEIVARKII LIATGSEVEL AMKAVEPLAQ QGIAARVVSM PSTNVFDRQD AEYRERVLPH GVRRVAIEAG VTSFWHKYVG LEGGVVGIDT FGESAPAGVL FKYFGFTVEH VVETAKAVLA
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