| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0621 |
|---|
| Symbol | |
|---|
| ID | 4450005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 692513 |
|---|
| End bp | 693508 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639692644 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_834267 |
|---|
| Protein GI | 116688644 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.272283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA GAACGTTCGT AACGCTGGCC GCCGCGGCGG CGGTGGTGAT GGGCAGCCCG
GTCGCGCACG CGGCCGACCC GGTCAAGATC GGCTTCCTGG TGAAGCAGCC GGAAGAGCCG
TGGTTCCAGG ACGAGTGGAA ATTCGCCGAG ATCGCCGCGA AGCAGAAGGG CTTCACGCTC
GTGAAGATCG GCGCGCCGTC CGGCGAGAAG GTGATGAGCG CGATCGACAA CCTGTCCGCG
CAGAAGGCGC AGGGCTTCAT CATCTGCACG CCCGACGTGA AACTCGGGCC GGGCATCGTT
GCGAAGGCGA AGTCGCACAA CCTGAAGATG ATGACGGTCG ACGACCGCCT CGTCGACGGC
GCAGGCAAGC CGATCGAGTC GGTGCCGCAC ATGGGGATTT CCGCGTACAA CATCGGCAAG
CAGGTCGGCG ACGGCATCGC GGCCGAGATC AAGAAGCGCG GCTGGGACAT GAAGGACGTC
GGCGCGATCG ACATCACCTA CGAGCAACTG CCGACCGCGC ACGACCGCAC GAGCGGCGCG
ACCGACGCGC TGGTCGCCGC CGGCTTCCCG AAGGCGAACG TGATCGCGGC GCCGCAGGCG
AAGACCGATA CGGAGAACGC GTTCAACGCG GCGAACATCG CGCTCACGAA GAACCCGCAG
TTCAAGCACT GGGTCGCGTA CGGCCTGAAC GACGAGGCCG TGCTCGGCGC GGTGCGCGCG
GCGGAAGGGC GCGGCTTCAA GGCCGACAAC ATGATCGGCA TCGGCATCGG CGGTTCCGAT
TCGGCGTTGA ACGAGTTCAA GAAGCCGCAG CCGACGGGCT TCTACGGCAC CGTGATCATC
AGCCCGAAGC GCCACGGCGA GGAAACCTCG GACCTGATGT ACACGTGGAT CACGCAGGGC
AAGGCGCCGC CGCCGCTGAC GCTGACGACC GGCATGCTGG CGACGCGCGA CAACGTGGCG
AAGGTGCGCG AGGAGATGGG GCTCGCGTCG AAGTAA
|
|---|
| Protein sequence | MKRRTFVTLA AAAAVVMGSP VAHAADPVKI GFLVKQPEEP WFQDEWKFAE IAAKQKGFTL
VKIGAPSGEK VMSAIDNLSA QKAQGFIICT PDVKLGPGIV AKAKSHNLKM MTVDDRLVDG
AGKPIESVPH MGISAYNIGK QVGDGIAAEI KKRGWDMKDV GAIDITYEQL PTAHDRTSGA
TDALVAAGFP KANVIAAPQA KTDTENAFNA ANIALTKNPQ FKHWVAYGLN DEAVLGAVRA
AEGRGFKADN MIGIGIGGSD SALNEFKKPQ PTGFYGTVII SPKRHGEETS DLMYTWITQG
KAPPPLTLTT GMLATRDNVA KVREEMGLAS K
|
|---|
| |