| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0615 |
|---|
| Symbol | |
|---|
| ID | 4449999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 686560 |
|---|
| End bp | 688170 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639692638 |
|---|
| Product | peptidase S10, serine carboxypeptidase |
|---|
| Protein accession | YP_834261 |
|---|
| Protein GI | 116688638 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.218301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGA GCAAAGCGAA GCTGTTGTTG GGAGTGGTGT GTTCTTCGCT GATTCTGACG
GCCTGCAATG ACGACGTGAC GTCGTCGTCT GCAGCGAGCG CCGCGAATTC AGCCGATCCT
GCCGGTCAGG TCGACCGCGC GTACAACGAT CCGAACAGTT ATTCGTCGAG TGCGAACGCG
TCGCTCGACG CATCCGCCGC GGTCGAGAAG GCCGCCGTCA CGCACCATCA GATCACGCTG
AACGGCAAGA CGATCCGGTA CACGGCCACC GCCGGCCACC TCGTCGCCCG CAATCCGCAG
ACGGGCGCGC CCGAAGCCTC GTTCTTCTAC GTCGCCTACA CGGCCGACAA CCAGCCCGCG
GCGAAGCGGC CCGTCACGTT CCTGTACAAC GGTGGCCCCG GTTCGGCCTC GGTGTGGCTG
CACCTCGGCT CGTTCGGCCC GCGCCGGATC CAGACCGGCG ACCCGAACGC GAACACGTCG
ACGTTCCCGT TCGTCGACAA CCAGGAAACC CTGCTCGACA CGACCGACCT CGTGTTCGTC
GATGCGATCG GCACCGGCTT CTCCGAAGCG GTCGCGCCGA ACACGAACCA GACGTTCTGG
GGCGTCGATC AGGACGCCGG CGCGTTCCGC GATTTCGTGA CGCGCTACCT GAGCGTGAAC
CAGCGCAGCG CTTCGCCGAA ATACCTGTTC GGCGAGTCGT ACGGCACGCC GCGCACCGAC
GTGCTCGCGA ACCTGCTCGA GACGGCCGGC GTGAAGCTCG ACGGCATCGT GCTGCAGTCG
TCGATCCTGA ACTACAACAC GAACTGCGAC ATGGCGAGCG ACTATGTCGG CAACTCGAAC
AACGGCGCGA GCCCGGTGAG CTGCGCGGGC TTCGTGCCGT CGTACGGCAC GGTCGGCGCG
TATTACCAGC TCGACAACCC GAACCCGTCG AACCTGCCGC AGTATGCGGA CCAGATGCGC
CTGCTGACGG CCGGCAGCTA CGCGCCGGCC GTGAACGCGT ACCTCGCGAG CCACACGCCG
CCGCCGCCGA ATCTCGTCAC GACGATGGCG AATTCGACCG GCGTGAAGCA GGCGTTGTGG
AATGCGGACT TCAACGTGGT CCCGACCTTC TTCGACAACA GCTTCCAGCT GTCGCTGGTG
CCGGGCACGC TGATCGGCCG CTACGACGCA CGCGTGAACG TGCCGGTGTC GAGCCCGCTC
GCGGCCGACG GCGATCCGTC CAGCTCGTTC ATCACGAAAC CGTTCACCGA CACGATCGGC
AGCTACCTGC CGAACGAGCT GAAGTACACC GCGCAGTCGG CCTACTCGGT AAGCAGCAAT
GCGATCAACA CGTGGGACTG GACGCACGAC GGCCTCGCGA TGCCCGACAC GATCCCCGAC
CTGGCCGCGG CGCTGACGCT GAATCCGCAG CTGAAGGTGC TGTCGCTGAA CGGGTATCAC
GACATCGCGA CGCCGTTCTA CCAGACCGAG CTCGACCTCG CGCGGCTCGG CACGCAACCG
AACCTGACGA TCAAGGACTA TCAGGGCGGG CACATGGTCT ATCTCGACGA TACGTCGCGT
CCGCAGGAGA AAGCCGACCT CGTGACCTTC TACAGCGCGG CCGCGCACTG A
|
|---|
| Protein sequence | MPASKAKLLL GVVCSSLILT ACNDDVTSSS AASAANSADP AGQVDRAYND PNSYSSSANA
SLDASAAVEK AAVTHHQITL NGKTIRYTAT AGHLVARNPQ TGAPEASFFY VAYTADNQPA
AKRPVTFLYN GGPGSASVWL HLGSFGPRRI QTGDPNANTS TFPFVDNQET LLDTTDLVFV
DAIGTGFSEA VAPNTNQTFW GVDQDAGAFR DFVTRYLSVN QRSASPKYLF GESYGTPRTD
VLANLLETAG VKLDGIVLQS SILNYNTNCD MASDYVGNSN NGASPVSCAG FVPSYGTVGA
YYQLDNPNPS NLPQYADQMR LLTAGSYAPA VNAYLASHTP PPPNLVTTMA NSTGVKQALW
NADFNVVPTF FDNSFQLSLV PGTLIGRYDA RVNVPVSSPL AADGDPSSSF ITKPFTDTIG
SYLPNELKYT AQSAYSVSSN AINTWDWTHD GLAMPDTIPD LAAALTLNPQ LKVLSLNGYH
DIATPFYQTE LDLARLGTQP NLTIKDYQGG HMVYLDDTSR PQEKADLVTF YSAAAH
|
|---|
| |