| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0578 |
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| Symbol | |
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| ID | 4450695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 649608 |
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| End bp | 650894 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639692601 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_834225 |
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| Protein GI | 116688602 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000399212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGCTC ACATGCATTT CCCTTCCCCC GGGGCGCCGC TGCACACGCA GTCGCCGCCC
GCGCATTCCG ACGCGCCAGC GGCCGCGCCC CATGCACTCG ATGCGGCGCA GCTCGACGAT
GCCCCCGCCG TACGCCTGCT GACGGATACG CTACACGCGG CGCGTGTGCG CGACGCGTCG
GACATCCACG TCGAGCCATT CGAGGCCGGC TGGCGCATCC GTCTGCGCAT CGACGGCGTG
CTGCATGAAC ATGCGCGACC GCCGCTGCAC CTGCGCGATG CGCTCGTCAC GCGGATCAAG
GTGCTCTCGC GCATGGACAT CGCCGAGCGG CGGCTTCCGC AGGACGGCCG GCTGCGCATC
GCGATCGACG GCGGCACGCG CGGCGACTAC CGCGTCAGCT CGCTGCCCAC GCTGTTCGGC
GAAAAGCTCG TGCTGCGGCG ACTCGAAACG CTGCCGCCCG ATCTCACGCT TGCCAACCTC
GGCTTCGACG CGCGGCAGGC CGCCGCGATG GAGGCCGCGA TCCGCGCGCC GCATGGCCTC
GTGCTCGTCA CGGGCCCGAC CGGCAGCGGC AAGACGCTGT CGCTCTACTG CGCGCTGCAG
ATGCTCGATC GCGACGCGCA CAACGTCTGC ACGGTGGAAG ATCCCGCCGA AATCCAGCTC
GACGGGATCA ACCAGGTGGG AGTCGCCGAC AAGGCGGGGC TCACGTTCGC GACGGCGCTG
CGCGCGCTGT TGCGGCAGGA CCCGGACGTC ATCATGGTCG GCGAGATTCG CGATGCGGAA
ACGGCCGATG TCGCGATCAA GGCCGCGCAG ACCGGTCATC TCGTGCTGTC GACCCTGCAC
ACGAACGACG CGCCGGCGGC CGTCGCGCGG CTGCTCGACA TCGGCGTCGC GCCATACAAC
CTCGCGGCCG CGCTGCACCT CGTCACCGCG CAGCGTCTCG TCCGGCGCCT GTGCGTCGCG
TGCCGCGTGC ATTCGGACGC ATCGGCGCAC GCGCTGCGGG AAGCCGGCTG CGACCCGGCG
GCGCTGGCAG CCGGATGGCG GCCGTTCGTC GCGCGCGGCT GTTCCGCCTG TCACGGCATC
GGCTATCGCG GCCGCATCGG CCTGCATCAG ACGATGCCGG TATCGCCCGG GCTGGCCGAG
CGCATCGTCG CGCGGGCGAG CGTCGGCGAG CTCGCGCAAT GCGTGGCGGC CGAGGGCGTG
CGCAGCCTGC GCGACGCGGC ATTCGCGCGC GTCCTGGACG GCACGACGAG CATCGCGGAA
GCCGTCGCCG CCACACCTGC GGCATGA
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| Protein sequence | MPAHMHFPSP GAPLHTQSPP AHSDAPAAAP HALDAAQLDD APAVRLLTDT LHAARVRDAS
DIHVEPFEAG WRIRLRIDGV LHEHARPPLH LRDALVTRIK VLSRMDIAER RLPQDGRLRI
AIDGGTRGDY RVSSLPTLFG EKLVLRRLET LPPDLTLANL GFDARQAAAM EAAIRAPHGL
VLVTGPTGSG KTLSLYCALQ MLDRDAHNVC TVEDPAEIQL DGINQVGVAD KAGLTFATAL
RALLRQDPDV IMVGEIRDAE TADVAIKAAQ TGHLVLSTLH TNDAPAAVAR LLDIGVAPYN
LAAALHLVTA QRLVRRLCVA CRVHSDASAH ALREAGCDPA ALAAGWRPFV ARGCSACHGI
GYRGRIGLHQ TMPVSPGLAE RIVARASVGE LAQCVAAEGV RSLRDAAFAR VLDGTTSIAE
AVAATPAA
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