| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0577 |
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| Symbol | |
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| ID | 4450694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 648400 |
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| End bp | 649611 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639692600 |
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| Product | type II secretion system protein |
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| Protein accession | YP_834224 |
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| Protein GI | 116688601 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00962618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGC GCACGCCACC GCGCGAAACC CGCTTTGCAT GGCGCGGCCG CCGTCGCGAC
GGCTCGCCCC GCCGCGGGAC CGTCATCGCC TTCGACGCCG CGGCCGCGCG CGCCACGCTC
GCGCGCGAAG GCATTGCGGT ACTGTCGCTC GACGTTCGCG GGCCGGCCCG TCCGCCTGCG
GCGGCCGCGC GCGACATCAC ACGCTTCACG CGCCAGCTCG CGAGCCTGCT GCAGGCCGGC
CTGCCGCTCG CGCCGTCGCT CGAGATGCTC GCGCGCACCC GCACGCGCGA CGGCGTGCCC
CGCATCGCCG CGGGGCTCGC CCGCGAGATC GTCGGCGGCC GGCGCTTCGC CGATGCACTC
GCACGCTATC CATCGCAATT CGGCACGCTG TATCGCCAGT TGATCGAGGT CGGCGAGGCG
TCCGGTTCGC TCGGCATCGT ACTGACGCGG GTTGCGGAAC ACCGCGAGCG CGCCGATGCG
CAATGGCGCA AGCTGCGTGC CGCGCTCGCG TATCCGGCCG CCGTCATCCT GTTCGCACTC
GCGATCTCGG CGGCATTGAT GGTGTGGGTC GTGCCGACCT TCCGGCAGAT CTTCGACGGC
TTCGGCGCCG CCCTGCCCGC GCCGACCCGC GCACTGCTCG CGCTGTCCTC CGCGCTGTCG
GCATGGGGCG GCGTGTTCCT GGCCGGTGCG GCCGCCACGG GGCTTGCCGC ACAGCACGCG
CTTCGGCGCT CGGCCGCGCT ACGCCATGTG CTAGCGCGGC GCCTGCTGCG CGCGCCGCTC
GCGGGCAGCG CGCTGGAACG GTTCGCGGCC GCACGCTGGT GCCGGTCGCT GGCGACCCTG
CTCGGCGCCG GCGTGCCGCT CGCCGATGCG TTCGCCACGC TCGAGCGCAC CGCCGGCCAT
CCGGTGTTCG CGCACGCCAC CGCGCACATC GCCGCACGCG TGCTGCGCGG CGTGCGTCTG
GCCGATGCGA TGCATTCGGC CGGCTGCTTT CCGGACGACG TCGTGCAACC GATCGCCGTC
GCCGAGGAAA CCGGTGCGCT CGACACGATG CTCGCCGACA TCGCCGCATT GTGCGAACGC
CAGCTCGACG CGCGTCTCGA TACGCTCGCG GCGCTGGGTG AACCGTTGAT CGTGATCGTC
CTGGGCGCAC TCGTCGGCGG CCTTGTGATC GCGATGTACC TGCCGATCCT TCAGCTCGGC
AACGTGGTGT AG
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| Protein sequence | MSMRTPPRET RFAWRGRRRD GSPRRGTVIA FDAAAARATL AREGIAVLSL DVRGPARPPA
AAARDITRFT RQLASLLQAG LPLAPSLEML ARTRTRDGVP RIAAGLAREI VGGRRFADAL
ARYPSQFGTL YRQLIEVGEA SGSLGIVLTR VAEHRERADA QWRKLRAALA YPAAVILFAL
AISAALMVWV VPTFRQIFDG FGAALPAPTR ALLALSSALS AWGGVFLAGA AATGLAAQHA
LRRSAALRHV LARRLLRAPL AGSALERFAA ARWCRSLATL LGAGVPLADA FATLERTAGH
PVFAHATAHI AARVLRGVRL ADAMHSAGCF PDDVVQPIAV AEETGALDTM LADIAALCER
QLDARLDTLA ALGEPLIVIV LGALVGGLVI AMYLPILQLG NVV
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