Gene Bcen2424_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0576 
Symbol 
ID4450693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp647444 
End bp648355 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID639692599 
Productprepilin peptidase 
Protein accessionYP_834223 
Protein GI116688600 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0251238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCAG TGCCCCTGTC CACCGTTTCC GATTCGCCCG AGGGCACGCT GCTCGCGCTG 
GCGATGCTGC CGCCCGCGCT GCAGTATGCG TTCGCGGTCG TCATCGGCCT TTGCATCGGC
AGCTTCCTGA ACGTGGTCGT GCACCGGTTG CCCGTGATGA TGCAGCGCGC GTGGCAGGCC
GAGATCGCCG AAGCGACCGG CGCCGCGGGC GCCCCGCCCG ACGACGGTTA TCCGCCGCGC
TACGATCTGT GGCGCCCGCG CAGCGCCTGC CCGCACTGCG GCCACGTGTT GCGCGCCTGG
GAAAACATTC CGCTCCTTAG CTACCTGATG CTGCGCGGCC GCTGCCGGCG CTGCGGCCAT
GCAATCGGCA TCCGCTATCC GCTCGTCGAA CTCGCGTGCG CACTGCTCGC GGCCGGCTCG
CTCGCGGCGT TCGGCCCGAC CGTCGCCGCG TTCGCCGCGT TCGCGCTGTG CGCGGCGCTG
CTCGCGATGA GTGCGATCGA TATCCGGACC GGCTACCTGC CCGACTCGAT GACGCTGCCA
TTGCTGTGGG CCGGGCTCGT GCTGAACCTC GGCGGCACTT TCACGTCGCT GCGCTCGGCC
GTGATCGGCG CGATGGCCGG CTACCTGTTC CTGTGGTCGA TCTACTGGCT GTTCAAATGG
CTGCGCGGCA TCGAGGGCAT CGGTTTCGGC GACCTGAAGC TGCTTGCCGC GCTCGGCGCA
TGGATGGGCT GGGCCGCACT GCCGCAGGTC GTGCTGTTCG CGGCGGTGAC CGGCGCGGTC
GTCGGGCTCG TCGCGACCTG GCGCGGCCGC ATGCGCTTCG AGGAGCCGAT TCCATTCGGC
CCGTTCCTCG CGGCCGGCGG CGTCGCCACG CTGTTTTTCG GCACCCCTTT CTATGCGGCG
CTCGGAGGCT GA
 
Protein sequence
MTPVPLSTVS DSPEGTLLAL AMLPPALQYA FAVVIGLCIG SFLNVVVHRL PVMMQRAWQA 
EIAEATGAAG APPDDGYPPR YDLWRPRSAC PHCGHVLRAW ENIPLLSYLM LRGRCRRCGH
AIGIRYPLVE LACALLAAGS LAAFGPTVAA FAAFALCAAL LAMSAIDIRT GYLPDSMTLP
LLWAGLVLNL GGTFTSLRSA VIGAMAGYLF LWSIYWLFKW LRGIEGIGFG DLKLLAALGA
WMGWAALPQV VLFAAVTGAV VGLVATWRGR MRFEEPIPFG PFLAAGGVAT LFFGTPFYAA
LGG