Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0576 |
Symbol | |
ID | 4450693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 647444 |
End bp | 648355 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639692599 |
Product | prepilin peptidase |
Protein accession | YP_834223 |
Protein GI | 116688600 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0251238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCAG TGCCCCTGTC CACCGTTTCC GATTCGCCCG AGGGCACGCT GCTCGCGCTG GCGATGCTGC CGCCCGCGCT GCAGTATGCG TTCGCGGTCG TCATCGGCCT TTGCATCGGC AGCTTCCTGA ACGTGGTCGT GCACCGGTTG CCCGTGATGA TGCAGCGCGC GTGGCAGGCC GAGATCGCCG AAGCGACCGG CGCCGCGGGC GCCCCGCCCG ACGACGGTTA TCCGCCGCGC TACGATCTGT GGCGCCCGCG CAGCGCCTGC CCGCACTGCG GCCACGTGTT GCGCGCCTGG GAAAACATTC CGCTCCTTAG CTACCTGATG CTGCGCGGCC GCTGCCGGCG CTGCGGCCAT GCAATCGGCA TCCGCTATCC GCTCGTCGAA CTCGCGTGCG CACTGCTCGC GGCCGGCTCG CTCGCGGCGT TCGGCCCGAC CGTCGCCGCG TTCGCCGCGT TCGCGCTGTG CGCGGCGCTG CTCGCGATGA GTGCGATCGA TATCCGGACC GGCTACCTGC CCGACTCGAT GACGCTGCCA TTGCTGTGGG CCGGGCTCGT GCTGAACCTC GGCGGCACTT TCACGTCGCT GCGCTCGGCC GTGATCGGCG CGATGGCCGG CTACCTGTTC CTGTGGTCGA TCTACTGGCT GTTCAAATGG CTGCGCGGCA TCGAGGGCAT CGGTTTCGGC GACCTGAAGC TGCTTGCCGC GCTCGGCGCA TGGATGGGCT GGGCCGCACT GCCGCAGGTC GTGCTGTTCG CGGCGGTGAC CGGCGCGGTC GTCGGGCTCG TCGCGACCTG GCGCGGCCGC ATGCGCTTCG AGGAGCCGAT TCCATTCGGC CCGTTCCTCG CGGCCGGCGG CGTCGCCACG CTGTTTTTCG GCACCCCTTT CTATGCGGCG CTCGGAGGCT GA
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Protein sequence | MTPVPLSTVS DSPEGTLLAL AMLPPALQYA FAVVIGLCIG SFLNVVVHRL PVMMQRAWQA EIAEATGAAG APPDDGYPPR YDLWRPRSAC PHCGHVLRAW ENIPLLSYLM LRGRCRRCGH AIGIRYPLVE LACALLAAGS LAAFGPTVAA FAAFALCAAL LAMSAIDIRT GYLPDSMTLP LLWAGLVLNL GGTFTSLRSA VIGAMAGYLF LWSIYWLFKW LRGIEGIGFG DLKLLAALGA WMGWAALPQV VLFAAVTGAV VGLVATWRGR MRFEEPIPFG PFLAAGGVAT LFFGTPFYAA LGG
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