| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0515 |
|---|
| Symbol | |
|---|
| ID | 4450365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 574015 |
|---|
| End bp | 574566 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639692533 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_834162 |
|---|
| Protein GI | 116688539 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.170108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA CCGCGGTGAT CGTGGTCGAC ATGCAGCGCG GGCTGGTGGA GCGGGCGCAG
CCCGCGTACC GGCTCGACGA CGTGGTGTCG GGCATCAACC GGTTGACGGC GGCGGCGCGC
GCGGCGAACG CGCCGGTGTG CTTCGTGCAG CACGACGGCG ACGCGGACGA CGACGTCGTG
CCCGGCACGC CGGGCTGGGA ACTGCATGCG GGGCTGGTCG TCGGTCGCGA CGACTGGCGC
GTGCGCAAGC AGGCGAGCGA TGCGTTTCAC GACACGCCAC TCGCGGCGCA GCTCGATCGC
CACGGCATCC GCTCGGTGCT GATCTGCGGC TATGCGACCG AGTTTTGCGT CGATTCGGCC
GCGCGCCGCG CCGCGCTGCT CGGCTACCGG ACGACCGTCG TGTCCGACCT GCACACGACG
AACGAGCGTG CCCACCTGTC GGCGGCGCAG ATCGTCGCGC ACCATCACTT CATCTGGAAC
AACAATTCGC TGTCGGGCAA CGCGGTGACG CCGCGTCCGC TCGCGGACGT GCTCGCTACG
GAGTTTGCAT GA
|
|---|
| Protein sequence | MADTAVIVVD MQRGLVERAQ PAYRLDDVVS GINRLTAAAR AANAPVCFVQ HDGDADDDVV
PGTPGWELHA GLVVGRDDWR VRKQASDAFH DTPLAAQLDR HGIRSVLICG YATEFCVDSA
ARRAALLGYR TTVVSDLHTT NERAHLSAAQ IVAHHHFIWN NNSLSGNAVT PRPLADVLAT
EFA
|
|---|
| |