| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0504 |
|---|
| Symbol | |
|---|
| ID | 4450354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 562500 |
|---|
| End bp | 564098 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639692522 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_834151 |
|---|
| Protein GI | 116688528 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.907763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGTT CTATTCAACG GAACATCGGC CCGTTTGCAT TGATGCTGAC GGGGCTGGGT
TCGATTATCG GCTCGGGCTG GCTGTTCGGT GCCTGGAAAG CCGCGAAGAT CGCCGGTCCG
GCGGCGATCT GCGCCTGGAT CATCGGCGCC GTCGTGATTC TGGCGATTGC GCTGACGTAT
GCGGAACTGG GCGCGATGTT CCCCGAGTCG GGCGGCATGG TGCGTTACGC GCGCTACTCG
CACGGTTCGC TGGTGGGCTT CATCAGTGCA TGGGCCAACT GGATCGCAAT CGTATCCGTG
ATTCCGATCG AGGCCGAAGC GTCGATCCAG TACATGAGCA CGTGGCCGTA TCCGTGGGCG
CACGCGTTGT TCGTGAACGG CGAATTGCAG ACCCTCGGCC TGCTGCTGTC GGCCGTGCTG
GTCGTCGTCT ACTTCATGCT GAACTACTGG GGTGTGAAGG CCTTCGCGCG GGCGAACACC
GCGATCACGA TCTTCAAGTT CCTGATCCCC GGCCTCACGA TCCTCGGCCT GATGCTGACG
AGCTTCCACT CGGAGAACCT CGGCGTCGCA TCGAATGCGA GCTTCGCGCC GTACGGCTGG
TCGGCCGTGC TGACCGCGGT CGCGACGAGC GGCATCGTGT TCGCGTTCAA CGGCTTCCAG
AGCCCGGTGA ACCTGGCCGG TGAAGCGCGC AATCCGTCGC GCAGCGTGCC GTTCGCGGTG
ATCACGTCGA TCCTGCTGGC GCTCGTGATC TACGTGCTGC TGCAAATGGC CTATATCGGT
TCGGTGAATC CGGCCGACGT CGCGAAGGGC TGGGCGCACT TCAACTTCTC GTCGCCGTTC
GCGGAACTCG CGATCGCGCT GAACCTGAAC TGGCTCGCGA TCCTGCTGTA CGTCGACGCG
TTCATCAGCC CGAGCGGCAC CGGTACGACC TACATGGCGA CGACCACCCG CATGATCTAT
GCAATGGAGC GCAACAACAC GATGCCGAAG ATGTTCGGCA ACGTGCATCC GATCTACGGC
GTGCCGCGCC AGGCGATGTG GTTCAACCTG CTCGTGTCGT TCGTGTTCCT GTTCTTCTTC
CGCGGCTGGA GCTCGCTCGC GGCGGTGATC TCGGTCGCGA CGGTGATCTC GTACCTGACC
GGCCCGATCA GCCTGATGGC GCTGCGCCGT TCGGCGACCG ACATCGAGCG TCCGCTGTCG
ATTCCGCTGA TGAAGCTGAT CGCCCCGTTC GCGTTCGTGT GCGCCTCGCT GATCCTGTAC
TGGGCGAAGT GGCCGCTGAC GGGCGAAATC ATCCTGCTGA TGATCGTCGC GCTGCCGGTG
TATTTCTACT TCCAGGCGAA GTCGGGCTGG ACCGGCTGGG GCGCCGACCT GAAGGCCGCA
TGGTGGCTGG TCGCGTACCT GCCGACGATG GCCGTGCTGT CGCTGATCGG CAGCAAGGAG
TTCGGCGGTC ATGGCTACCT GCCGTACGGC TGGGACATGC TGATCGTCGC GGCGATCTCG
CTGGTGTTCT ACTTCTGGGG CGTGAATACC GGTTACCGGA CCCAGTATCT CGACGAGCGC
GAGTCGCACG ACGAGATCCT CGAAGGGATC GGTGCCTGA
|
|---|
| Protein sequence | MKSSIQRNIG PFALMLTGLG SIIGSGWLFG AWKAAKIAGP AAICAWIIGA VVILAIALTY
AELGAMFPES GGMVRYARYS HGSLVGFISA WANWIAIVSV IPIEAEASIQ YMSTWPYPWA
HALFVNGELQ TLGLLLSAVL VVVYFMLNYW GVKAFARANT AITIFKFLIP GLTILGLMLT
SFHSENLGVA SNASFAPYGW SAVLTAVATS GIVFAFNGFQ SPVNLAGEAR NPSRSVPFAV
ITSILLALVI YVLLQMAYIG SVNPADVAKG WAHFNFSSPF AELAIALNLN WLAILLYVDA
FISPSGTGTT YMATTTRMIY AMERNNTMPK MFGNVHPIYG VPRQAMWFNL LVSFVFLFFF
RGWSSLAAVI SVATVISYLT GPISLMALRR SATDIERPLS IPLMKLIAPF AFVCASLILY
WAKWPLTGEI ILLMIVALPV YFYFQAKSGW TGWGADLKAA WWLVAYLPTM AVLSLIGSKE
FGGHGYLPYG WDMLIVAAIS LVFYFWGVNT GYRTQYLDER ESHDEILEGI GA
|
|---|
| |