Gene Bcen2424_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0465 
Symbol 
ID4449666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp517014 
End bp517625 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID639692483 
Producthypothetical protein 
Protein accessionYP_834112 
Protein GI116688489 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.144688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCGT CCATGATTCG CTACGCGCTG CCGCTGGTTG CCTGCGCCCT TTTGGCCGGA 
TGCGCGGCCG CCCCGCTGCT CGGCTCGGCC GCGAGCGCCG TGATGTCCGC GGCCGGCATC
GGCAAGCCCG AGGTGCCCGA CGCGCAGAAG CCGCCGCGCA ACATCGGGCT CACGCTGGCC
GCCGCGCCGA ACCTGAATGC CGCGACCGAC CACAAGCCGC TCGCGCTCGT CGTCCGGCTT
TATGCGCTGA AGGACCCGAC CTCGTTCCAG CAAGCGCCGT TCGACGCCTT TACCGATCCG
ACCAAGGAAA AAGCTGCACT CGGCGCCGAT CTGCTGAATG TGCGCGAAAT CACGCTGATT
CCGGGCCAGC GCTATACGGC AACCGAGAAG GTATCGCGCG AGGCCCAGGC ATTCGGCATC
GTCGCGCTGT TCCGCGATCC CGCACTGCAA CGATGGAAAC TGACATTCGA TCCGGCGAAA
TCGGAGAAAT CCGGCATAAT CATCGGCCTG CATAATTGCG CGATGACGGT CACCGACGGC
ACGGTCATCG CACCGCAACA AGGTGCGCCT TCGCAACCGC TGAATTTGCT GTCTTCGGTC
TCTTGCGGTT AA
 
Protein sequence
MRSSMIRYAL PLVACALLAG CAAAPLLGSA ASAVMSAAGI GKPEVPDAQK PPRNIGLTLA 
AAPNLNAATD HKPLALVVRL YALKDPTSFQ QAPFDAFTDP TKEKAALGAD LLNVREITLI
PGQRYTATEK VSREAQAFGI VALFRDPALQ RWKLTFDPAK SEKSGIIIGL HNCAMTVTDG
TVIAPQQGAP SQPLNLLSSV SCG