| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0459 |
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| Symbol | |
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| ID | 4449660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 505362 |
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| End bp | 508553 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639692477 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_834106 |
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| Protein GI | 116688483 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGC AGAACACAAT CGCCGCATTG CGCGGCGGAT TGCTTCAGCA GGACCGGTTG
TTGAAGCTCG ATACGCCATT GGGGAGCAAC GTCCTGACCG TGCAGCGGGC AGTTGGCCGC
TCACGTATCG GGCGCGCGTA CGAATTCACG CTGGACGTAC TGTCGACCGA TAGCGATCTG
GAGCTTAAAA AGCTGATCGC GCAGCCGGTC ACGTTGTGGA TTCAGCAAGG CGATCGCAGC
TATCGGCCGA TGAACGGCTA CGTGCACACC GCGCGCCGTC TGGGCGCCGA CGGCGGGCTC
ACGACCTATC AGCTCACGTT CGCCGATTTC ACCCATTTCC TGAAGTTCCG TCGCGACCAG
CGGATCTGGA ACGATACGAC CGTCGACCAG ATCATCAGCG ACGTGCTGAA CCAGCATCCG
CAGGCGAAAG GCCATTTCCG CTTTGCGCTG TCGAAGCCGT TGCCGAACCG CTCGTACACG
CGACAGCACG ACACCGACTG GCATTTCATC CATCGACTGA TGGAGGACGA AGGGCTCTAC
TGCGCGTGGC AGCAGGCCGA CGACGGCAAG TCGCACACGC TCGTGGTGAC CGACAACCTG
CAGGCGTTCG CGCCGCTATC GCCGCAGACC GTGCGCTTCT ATCGTGGCGG GGCGGCGAGC
GAAGCCGATG CGTTCACGCA ATGGTCGGGC ACGCGCACGC TGCAGAGCGT CACGCGTTCG
ACGCGCACGT TCGACTACAA GAATCCCGCG CAGCCGTCGA ATCCGAAAGG CACGTCGCTG
CCGACGATGG CCGGTCAGGG CGAATTGCCC GATCAGCTCG AAGTCTACGA ATACACCGGT
GCGTACACGT ATCTGGACCA GACGCGCGGC GACCATCTGA CGAAGATCCG GATGGAGCAG
TGGGAGTCGG AGGCGAAGCG CTTCCACGGC GCGGGCGGCG TGCGTGCGAT CGATGCCGGC
CGGCGCTTCA CGCTGGCGGA TCATCCCGAA CACGATCGCG ATCCGGCCGA CCAGCGCGAA
TTCGCGGCGA TCGGCGTCGA ATGGTGGATC GAGAACAACC TCCCCGTTTC GAACGGCAGC
GCGGATTTTC CGTACAGCCT GCGTGAAGCG TTGACGCAAG CGCAGGAGGG CTACGGTGCC
GACCCCGCGT TTCGCGTGCC GCACGACGAC GGCTCGGTCG GCTTCTATCT CGTCGAGGTC
GAAGCGCAGC GCGTGAACGT GCCGTATCGC AGCCCGTTCG AGCATAAAAA GCCGGAGATG
CACCTCGAGA CGGCGATCGT CGTCGGGCCG CAGGGCGAGG AGGTTTATAC CGACGAGCTG
AACCGGACTC GCGTGCAGTT CGTGTGGGAT CGCCTGAACC CGGGCAACGA GAACGCATCG
TGCTGGGTGC GCGTCGTGCA GTCGGATACG GGCGGCGGCT ACGGCGGTGT GCACGTGCCG
CGCATCGGCG AGGAAGTGCT GATCGACTAC GTCGGCGGCG ACTGCGACCG GCCGCTGGCC
GTGGGGCGCG TGTACAACGG CGCGAACCAG CCGCAGTGGC ATAGCGACGG GATTCTGTCC
GGCTATCGAT CGAAGGAGTA TTCGGGCGGC GGCTACAACC AGCTCGTGAT GGACGACGCG
ACCGGGCAGA ACCGCGTGCA ACTGATGAGC AGCAGCGCGA ACAGCCTGCT GCATCTCGGC
TACATCATCG ACCAGAACGG CAATGCGCGC GGGTCGTATC TGGGCAGCGG TTTCGATCTG
CGCTCGGATG CGTATGGCGC GGTGCGGGCG AGCCAGGGCC TGTACGTGAC GACGCACCCG
AAGGCGGCGA ACAGCCAGCC GCTCGACGTG AAGGAGGCGC AGCAGCAGCT CGTGGCGGGC
GAGAGCCTGG TCGAGGCGAT GTCGGGCGTG AGCGAGCAGC ATCAGGCGGA GAGCCTGAAG
GACGCGCAGG ACACGATGCG TGCATTCACG GACGCGACGC AGGACAGCCA GTCGGGCAGC
GCGGCGGGCG GGCGCACGGC GGGCGGCGGC ACCGGTAACG CGAACGCGTT CAAGGAACCG
GTGATGCTGT TCGGCAGCCC GTCGGGAATC GGGATGTCGA CGCAGCAGTC GGTGCATATG
GTCGCGAACG ATCACGTGAA CGTGGCAAGC GGGCAGAGCG TGCACGTGGC CGCGGGCAAG
TCGCTGATCG GCAGCATCGG GCAGAAGCTG AGCCTGTTCG TGCAGAACGC GGGGATGAAG
CTGTTCGCGG GCAAGGGCAA GGTCGAGATC CAGGCGCAGT CGGACAACAT CGAGGTGACC
GCGCAGAAGG CGGTGAGGGT GGTGTCGGCG ACGGACCGGA TCGAGATCGC GGCCGATCAG
GGGATTTTGC TGACGAGCGG CGGCGGATAT ATCCGCATCA AGGACGGCGA CATCGAGATT
CATACGCCGG GCGCGGTCGA TGTGAAGGGG GCGTCGCATA CGTTCGCGGG GCCGGCGAGC
ATGGGGTATC CGCTGCCGAG CCCGCGGCCG GATCAGCCCG GGCAGCTCGA ACTGTTTCAC
AAGTACGTGA ACGGCGAGGC GGTGAAGGGC GGGCTGTTCA CGGTGAAGGA CGTGAACGGC
GCCGTGCTGA AGAAAGGCGC ACTCGACAAC AGCGGCTATA CGGTCGTGAG CGGCTTGCCG
CCGGGGGCGG TGCGCGTCGA ATTCGGGAAA GACCCACGCG AGTCGGATCA GCCGGCGAAC
TATTTCAAGC AGGCGAAGTG GCCGGCGGAG CCCGTGCAAC CGTCGCCCGA GGCCGCGCAG
GCCGCGGCGA GCGGACAGCT CGCGAGTCAG CTGCAAGGGA TGGCGCCGGC CGCGACGACC
GCGGCGATGG GGCTGGTGAG CGGCGGCGGC GCGGGTGCGG CCCTCGGCGG GCTCGCGAGC
GCCGCATTGC CGGCTGCTGC GACCGCGTTG GGTGGCGCCG GCGTGGCGTC CGCGTTGCAG
ACCGCCTCGA GCCTGAGCGG TGCGGCGAAG CAGGTGGCCG GGATGGTTCA GGCCGCCCGT
CAGGGCGGGC TTGCCGCGCT TGCCGCGCCG GCTGCGAATG CGGCGTCCGG GGCGTTGCAG
GGCGCGTTGC CCGGTGCATT GCCGGGCGTG GCCGGTATCG CGGGCAAGGG CGCCACGACC
GTGGCGTCGG CCGCGGGCGC GACGGGCATG AAACTGCCGA CAAGCGGGTT TGGCGGACCG
TTGAAATCCT GA
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| Protein sequence | MNMQNTIAAL RGGLLQQDRL LKLDTPLGSN VLTVQRAVGR SRIGRAYEFT LDVLSTDSDL
ELKKLIAQPV TLWIQQGDRS YRPMNGYVHT ARRLGADGGL TTYQLTFADF THFLKFRRDQ
RIWNDTTVDQ IISDVLNQHP QAKGHFRFAL SKPLPNRSYT RQHDTDWHFI HRLMEDEGLY
CAWQQADDGK SHTLVVTDNL QAFAPLSPQT VRFYRGGAAS EADAFTQWSG TRTLQSVTRS
TRTFDYKNPA QPSNPKGTSL PTMAGQGELP DQLEVYEYTG AYTYLDQTRG DHLTKIRMEQ
WESEAKRFHG AGGVRAIDAG RRFTLADHPE HDRDPADQRE FAAIGVEWWI ENNLPVSNGS
ADFPYSLREA LTQAQEGYGA DPAFRVPHDD GSVGFYLVEV EAQRVNVPYR SPFEHKKPEM
HLETAIVVGP QGEEVYTDEL NRTRVQFVWD RLNPGNENAS CWVRVVQSDT GGGYGGVHVP
RIGEEVLIDY VGGDCDRPLA VGRVYNGANQ PQWHSDGILS GYRSKEYSGG GYNQLVMDDA
TGQNRVQLMS SSANSLLHLG YIIDQNGNAR GSYLGSGFDL RSDAYGAVRA SQGLYVTTHP
KAANSQPLDV KEAQQQLVAG ESLVEAMSGV SEQHQAESLK DAQDTMRAFT DATQDSQSGS
AAGGRTAGGG TGNANAFKEP VMLFGSPSGI GMSTQQSVHM VANDHVNVAS GQSVHVAAGK
SLIGSIGQKL SLFVQNAGMK LFAGKGKVEI QAQSDNIEVT AQKAVRVVSA TDRIEIAADQ
GILLTSGGGY IRIKDGDIEI HTPGAVDVKG ASHTFAGPAS MGYPLPSPRP DQPGQLELFH
KYVNGEAVKG GLFTVKDVNG AVLKKGALDN SGYTVVSGLP PGAVRVEFGK DPRESDQPAN
YFKQAKWPAE PVQPSPEAAQ AAASGQLASQ LQGMAPAATT AAMGLVSGGG AGAALGGLAS
AALPAAATAL GGAGVASALQ TASSLSGAAK QVAGMVQAAR QGGLAALAAP AANAASGALQ
GALPGALPGV AGIAGKGATT VASAAGATGM KLPTSGFGGP LKS
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