| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0449 |
|---|
| Symbol | |
|---|
| ID | 4450262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 494177 |
|---|
| End bp | 495316 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639692467 |
|---|
| Product | TrbL/VirB6 plasmid conjugal transfer protein |
|---|
| Protein accession | YP_834096 |
|---|
| Protein GI | 116688473 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0124171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG ATGCGGTAAC GCAGATATTC GACTACATGG ATGCCGTGAC GCTCCAGATC
GTCGCCGAAA ACGTTAGCCG GATGATTGCA TGGGTCACGC CGCTCGCGGC GCTTGGCCTG
ACCATTATGC TCATCATAGA TGGCGTGGCG ACGATGCTGC GGCCGAGCGG CGTACCGCTC
ACGCACCTCG TGGAGAAGTT CCTCAAGTAT TACGCGATTG TGGGGATCGC CGGCGCCGGT
GGCCTGTATG AAACAACGCT GGCCAGTACG GCCATCCACT TGCCCGATGA ACTGGCGTCC
AAGCTGCTTA TACACGGGAG CCTGGGTGCG AGTAACAGCG CCATAGCAAG CCTGATCGAT
GGCGCGATCG ACCACAGTCT GACCGTCATG CGCACGGTCT TCGCGAATTC GAGCCTGCTG
ACGAGCACCG GGATTGGGGC TTTCATTCTG GGCATTGTGC TCGTGCTTTC CACTCTACTG
ATCTGCGGCG TGGGCGCTGT CTCGATTCTG ATTGCGAAGT TCCTGCTCGC GCTTTCAGTT
TGCTTCGGCC CATTCTTCAT CTTCATGTTG CTGGCCCCGC CGCTTGCCAA TCTCTTCGGG
AACTGGCTCG GTTCGGTCTT GAACTACGTC ATCCTCATAG CGATAACGGC GATGAGCTTC
GGTGTTTTCA TGCACTTCTA CGACAGCGCC ATCTCGGCCG CGGCCAAGCC GAACCCGGAC
GCGGCCATCA TTGGCCCGAT CATCACGGCC GGCCTTGTCA CCGTTATGGC ACTCGGTTTG
TTGAAGGTCT TGCCCGACCT CGCGGCGCGA TGGACGAGTG GTGCCAAGAC AAATTTTGAT
CGTTTCCTGC CGCAGCCAAG CTCGTTTTCC GCAGCCCCCG GCGGAGGCGG GGGGAGCCAG
TCCGGGGGTA ACAACGGCGG CAGTGCAGGG GCAGGCAGCG GCTCGAATTC CGGAGGCGGG
AGCGCCGGCG GCTACTCGTC GAGTGGCAGC GGATACAGCT ACGCTCGAGG ATCGCAAGGC
AGTGCAGGCA CAGGTAGCGG CTCGAATTCC GGGACCGGCA GCGCCGGGGG CAACTCGTCT
AGTGGAGGCG GATACAGCTA CGCCCAAGGA TCGCAAGGCT CACAAAACAG GGGGACGTAA
|
|---|
| Protein sequence | MAFDAVTQIF DYMDAVTLQI VAENVSRMIA WVTPLAALGL TIMLIIDGVA TMLRPSGVPL
THLVEKFLKY YAIVGIAGAG GLYETTLAST AIHLPDELAS KLLIHGSLGA SNSAIASLID
GAIDHSLTVM RTVFANSSLL TSTGIGAFIL GIVLVLSTLL ICGVGAVSIL IAKFLLALSV
CFGPFFIFML LAPPLANLFG NWLGSVLNYV ILIAITAMSF GVFMHFYDSA ISAAAKPNPD
AAIIGPIITA GLVTVMALGL LKVLPDLAAR WTSGAKTNFD RFLPQPSSFS AAPGGGGGSQ
SGGNNGGSAG AGSGSNSGGG SAGGYSSSGS GYSYARGSQG SAGTGSGSNS GTGSAGGNSS
SGGGYSYAQG SQGSQNRGT
|
|---|
| |