| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0446 |
|---|
| Symbol | |
|---|
| ID | 4450259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 491220 |
|---|
| End bp | 492263 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639692464 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_834093 |
|---|
| Protein GI | 116688470 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.286621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCGTCAAGAC GCCTTCCGGT ACGTGGAAGG CCGTCATCCG CAAGATCGGC
TGGCCGACCT CGGCCAAGAC ATTCCGCACC AAACGCGATG CCGAGGATTG GGCGCGTCGA
ACAGAAGATG AGATGGTTCG GGGCGTCTAT CTGTCGCGTG CTCCCTCCGA AAAACTCACG
GTGTCAGCCG CGCTGAAGCG GTATATGGAA GAGGTGTCGG TTACCAAGAA GGCGACCACG
CAGCGCAGCG AGAGCTTTTC TGCGAAGCAC CTGGAGGCGT TCTTCGGGAA GTATTCGATG
GCGGCCGTTA GTGCCGAGCT CGTTGCCAAG TATCGCGACG AACGCCTCGC GGCTGGCAAA
TCAAACAACA CGGTTCGCCT CGAGCTTGCG ATGCTCGGGC ATCTCTTCCG GATGGCGATT
CAGGAGTGGG GAATTGGCCT GACTTTCAAT CCCGTCGCCA ATGTTCGCAA GCCGAGTCCC
GGTGCCGGCC GGGACCGGCG ATTGAGTCGT GATGAACACC AACGTCTCTT CGCGGCCGCC
GACGCCCATA GCAACCCGAT GCTCGGCTGG ATCGTGCGAC TTGCCGTCGA AACCGGCATG
CGATCGTCCG AGATCACGGG CTTGTGTCGC TCGCAAGTAG ATTTGGATCG GCGAGTCGTG
ACCCTCAGGG ATACAAAAAA CGGTTCCAGT CGTGTGGTGC CGCTGACGCG TGAGGCAGCC
GAAGTCCTCC GTGCAGCCCT GGACAATCCG ATACGGCCTA TTGACACCGA TCTCGTGTTC
TTCGGCGAGC CAGGGCGAGA CGGAAAGCGT AAGCCGTATG TGTTCCAGAA GCTCTGGACC
GGTATCGTGC GCGACCTCGG GATGGTCGAT CTGCATTTCC ACGATCTGCG ACATGAGGCA
GTCAGTCGGC TTGTTGAGGC GGGGTTGAGT GATCAGGAGG TGGCCTCGAT CAGCGGCCAT
AAGTCGATGC AAATGCTCAA GCGTTACACG CACCTACGAG CTGAAGATCT GGTGCAGAAG
CTCGACACTC TTCGACGCGC CTGA
|
|---|
| Protein sequence | MATIVKTPSG TWKAVIRKIG WPTSAKTFRT KRDAEDWARR TEDEMVRGVY LSRAPSEKLT
VSAALKRYME EVSVTKKATT QRSESFSAKH LEAFFGKYSM AAVSAELVAK YRDERLAAGK
SNNTVRLELA MLGHLFRMAI QEWGIGLTFN PVANVRKPSP GAGRDRRLSR DEHQRLFAAA
DAHSNPMLGW IVRLAVETGM RSSEITGLCR SQVDLDRRVV TLRDTKNGSS RVVPLTREAA
EVLRAALDNP IRPIDTDLVF FGEPGRDGKR KPYVFQKLWT GIVRDLGMVD LHFHDLRHEA
VSRLVEAGLS DQEVASISGH KSMQMLKRYT HLRAEDLVQK LDTLRRA
|
|---|
| |