Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_0438 |
Symbol | |
ID | 4450081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 483761 |
End bp | 484549 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639692455 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_834085 |
Protein GI | 116688462 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.434493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGACC CCCAGCAGAA CCCGGGCGAC GCCCCGGAAG AAACCTTCAT TTCCCATCTC GTCGAGCTTC GCGATCGCAT CATTCGCGCG GGGCTGGCCG TGATCGTCGT GTTCCTCGGG CTCGTCTACT GGGCGCCGGA CATCTTCAAG CTGCTCGCGC GGCCGCTGAT GGACAACCTG CCGAAAGACG GCAAGATGAT CGTCACCGAC GTCACCGGCT CGTTCTTCGT GCCGATGAAG GTGACGATGC TCGTCGCGCT TGTGATCGCG CTGCCGATCG TGCTGTACCA GATCTGGGCG TTCGTCGCGC CGGGGCTGTA TCAGCACGAG AAGAAGCTCG TCGCGCCGCT CGTCGGCAGC AGCTATTTCC TGTTCCTGTG CGGGATGGCG TTCGCGTATT TCCTCGTGTT CCCGACGATC TTCCGCGTGA TGGCGCACTA CAACGCGCCG CTCGGGGCCG AGATGACGAC CGACATCGAC AACTACCTGA GCTTCGTGCT GGGGATGTTC ATCGCGTTCG GGGTCACGTT CGAGGTGCCG ATCGTCGTCG TGCTGCTCGT CCGGATGGGC GTGCTGTCCC TGAAGAAGCT GAAGGAGATG CGGCCGTACG TGATCGTCGG CGCATTCGTG GTCGCGGCGG TCGTCACGCC GCCGGACGTG TTCTCGCAAC TGATGCTGGC GCTGCCGCTC GTCGTGCTGT TCGAGATCGG GCTGCTGGCC GCGCGGTTCT TCGTGCCGAA GAAGCCGGTC GAAGAAGGCG AGGCGGGGAA CGGCGAAGCC GCGGGCTGA
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Protein sequence | MSDPQQNPGD APEETFISHL VELRDRIIRA GLAVIVVFLG LVYWAPDIFK LLARPLMDNL PKDGKMIVTD VTGSFFVPMK VTMLVALVIA LPIVLYQIWA FVAPGLYQHE KKLVAPLVGS SYFLFLCGMA FAYFLVFPTI FRVMAHYNAP LGAEMTTDID NYLSFVLGMF IAFGVTFEVP IVVVLLVRMG VLSLKKLKEM RPYVIVGAFV VAAVVTPPDV FSQLMLALPL VVLFEIGLLA ARFFVPKKPV EEGEAGNGEA AG
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