| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0431 |
|---|
| Symbol | |
|---|
| ID | 4450074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 480418 |
|---|
| End bp | 481191 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639692448 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_834078 |
|---|
| Protein GI | 116688455 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.611276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAG CTAAACGCAT CATCCCCTGC CTGGACGTGA CCGCCGGGCG TGTCGTCAAG
GGCGTCAATT TCGTCGAGCT GCGCGATGCC GGCGACCCCG TCGAAATCGC CCGCCGCTAC
GACGACCAGG GTGCCGACGA ACTAACCTTC CTCGACATCA CCGCGACGTC CGACCAGCGC
GACCTGATCC TGCCGATCAT CGAAGCCGTC GCGTCGCAGG TGTTCATTCC GCTGACCGTC
GGCGGCGGCG TGCGCGCCGT CGAGGACGTG CGGCGCCTGC TGAACGCGGG CGCGGACAAG
GTCAGCATGA ATTCGTCGGC GGTCGCGAAC CCGCAGCTCG TGCGCGACGC GGCCGACAAG
TACGGCTCGC AGTGCATCGT CGTCGCGATC GACGCGAAGC GCGTGTCGGC CGACGGCGAG
ACGCCGCGCT GGGAAGTGTT CACGCACGGC GGCCGCAAGA ACACGGGCCT CGACGCGATC
GAGTGGGCGC GCAAGATGGC CGAGCTCGGC GCCGGCGAGA TCCTGCTCAC GAGCATGGAC
CGCGACGGCA CGAAGTCGGG CTTCGACCTC GCGCTCACGC GCGGCGTGTC GGACGCGGTG
CCGGTGCCGG TGATTGCGTC GGGCGGCGTC GGTTCGCTGC AGCATCTGGC CGACGGCATC
AAGGACGGCC GCGCCGACGC GGTGCTGGCC GCCAGCATCT TCCACTACGG CGAGCACACG
GTCGGCGAGG CGAAGCGCTT CATGTCCGAC CAGGGCATCC CGGTGAGACT GTGA
|
|---|
| Protein sequence | MALAKRIIPC LDVTAGRVVK GVNFVELRDA GDPVEIARRY DDQGADELTF LDITATSDQR
DLILPIIEAV ASQVFIPLTV GGGVRAVEDV RRLLNAGADK VSMNSSAVAN PQLVRDAADK
YGSQCIVVAI DAKRVSADGE TPRWEVFTHG GRKNTGLDAI EWARKMAELG AGEILLTSMD
RDGTKSGFDL ALTRGVSDAV PVPVIASGGV GSLQHLADGI KDGRADAVLA ASIFHYGEHT
VGEAKRFMSD QGIPVRL
|
|---|
| |