Gene Bcen2424_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0425 
SymbolhisD 
ID4449979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp474887 
End bp476203 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content70% 
IMG OID639692442 
Producthistidinol dehydrogenase 
Protein accessionYP_834072 
Protein GI116688449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA CCATCCGCAA GCTCGATTCG ACGAACGAAG GCTTCGGCGC CGCGCTGCGC 
GCCGTGCTCG CGTTCGAGGC GAGCGAAGAC GAAGCGATCG AGCAATCGGT CGCGAAGATC
CTCGCCGACG TGAAGTCGCG CGGCGACGCC GCGGTGCTCG AGTACACGAA CCGTTTCGAC
CGGCTGAGCG CGAACAGCGT CGCCGCGCTC GAACTGCCGC AGGACGCGCT GCAGACGGCG
CTCGACGGCC TCGCGCCGAA GGCGCGCGCG GCGCTGGAAG CGGCCGCGGC GCGGGTGCGC
GCGTACCACG AGAAGCAGAA GATCGAATGC GGCACGCATA GCTGGCAGTA CACGGAAAGC
GACGGCACGG TGCTCGGCCA GAAGGTCACG CCGCTTGACC GCGTCGGCCT GTACGTGCCG
GGCGGCAAGG CCGCGTATCC GTCGTCGGTG CTGATGAACG CGATTCCGGC GCGCGTCGCG
GGCGTCGGCG AGATCGTGAT GGTCGTGCCG ACCCCGGACG GCGTGAAGAA CGACCTCGTG
CTGGCGGCGG CGCTGCTCGG CGGCGTCGAT CGCGTGTTCA CGATCGGCGG CGCGCAGGCG
GTCGGCGCGC TCGCGTACGG CACCGAGACG GTGCCGGCCG TCGACAAGAT CTGCGGCCCC
GGCAACGCGT ACGTCGCGTC GGCGAAGCGC CGCGTGTTCG GCACGGTCGG CATCGACATG
ATCGCCGGGC CGTCGGAAAT CCTCGTGCTG TGCGACGGGA CGACCGATCC GAACTGGGTC
GCGATGGACC TGTTCTCGCA GGCCGAGCAC GACGAACTCG CGCAGTCGAT CCTGCTGTGC
CCGGACGCTG CATTCCTCGA TCGCGTCGAG AAGGCGATCG GCGAGCTGCT GCCGACGATG
CCGCGCCAGG ACGTGATCCG CGCGTCGCTC GAAGGCCGCG GCGCGCTGAT CAAGGTGCGC
GACATGGCCG AGGCATGCCG GATCGCGAAC GACATCGCGC CGGAACACCT CGAAATCTCG
GCGCTGGAGC CGCAGCAATG GGGCCAGCAG ATCCGCCACG CGGGCGCGAT CTTCCTCGGC
CGCTATACGA GCGAGAGCCT CGGCGACTAC TGCGCGGGCC CGAACCACGT GCTGCCGACG
TCGCGCACCG CGCGTTTCTC GTCGCCGCTC GGCGTGTACG ACTTCATCAA GCGCTCGAGC
CTGATCGAGG TCAGCGCGGA AGGCGCGCAG ACGCTCGGCG AGATCGCATC CGAGCTCGCC
TACGGCGAAG GGCTGCAGGC GCACGCGAGG AGCGCCGAGT TCCGGATGAA GGGCTGA
 
Protein sequence
MSITIRKLDS TNEGFGAALR AVLAFEASED EAIEQSVAKI LADVKSRGDA AVLEYTNRFD 
RLSANSVAAL ELPQDALQTA LDGLAPKARA ALEAAAARVR AYHEKQKIEC GTHSWQYTES
DGTVLGQKVT PLDRVGLYVP GGKAAYPSSV LMNAIPARVA GVGEIVMVVP TPDGVKNDLV
LAAALLGGVD RVFTIGGAQA VGALAYGTET VPAVDKICGP GNAYVASAKR RVFGTVGIDM
IAGPSEILVL CDGTTDPNWV AMDLFSQAEH DELAQSILLC PDAAFLDRVE KAIGELLPTM
PRQDVIRASL EGRGALIKVR DMAEACRIAN DIAPEHLEIS ALEPQQWGQQ IRHAGAIFLG
RYTSESLGDY CAGPNHVLPT SRTARFSSPL GVYDFIKRSS LIEVSAEGAQ TLGEIASELA
YGEGLQAHAR SAEFRMKG