| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_0417 |
|---|
| Symbol | |
|---|
| ID | 4449971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 468641 |
|---|
| End bp | 469603 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639692434 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_834064 |
|---|
| Protein GI | 116688441 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGA TCCGCATCAG GCACGCCGCG CTGGCGATGG CGGCAGTCGC CGCGTTGAGC
GGCTGCGCGA CCGTGCAGAC GCCGACCAAG GGCGATCCGC TCGAAGGCTT CAACCGGTCG
ATGTACAAGT TCAACGACAC GGTCGATACG TACGCGCTGA AGCCGGTCGC GAAGGGCTAC
CAGTACGTGG TGCCGCAGCC GGTGCGCGAC AGCGTGACGA ACTTCTTCTC GAACATCGGC
GACGTCTACA TCGCGGCGAA CAACATCGTG CAGCTGCGGA TCGCGGACGG CGTCGGCGAC
ATCATGCGCG TCGTGATCAA CACGGTGTTC GGCGTCGGCG GCCTGTTCGA CGTCGCGACG
ATCGCGAAGC TGCCGAAGCA CACGGCCGAC TTCGGGATCA CGATGGGCCG CTACGGCGTG
CCGTCGGGCC CGTATCTCGT GCTGCCGCTG CTCGGCCCGA GTACGCTGCG CGACACGGCC
GGCCTCGGCG TCGACTACGT CGGCAACCCG CTCACCTACG TGAAGCCGGA CGGCCTGAGC
TGGGGCCTGT TCGGCGTGAA CCTGGTCAAC ACGCGCGCGA ACCTGCTCGG CGCAGGCGAC
GTGCTGGATG CCGCGGCGCT CGACAAGTAT TCGTTCGTGC GCAACGCGTA CCTGCAGCGT
CGCCAGATGC TGATCAGCAA CGCGCGCGGC GAGGCCGCCG CGACGTCGAG CAACGACGCG
CTGCCGAAGT ACGATCTGCC GGAAGACGGC GCGGCACCGG CGGCAGCCGG CGCGGCCGGA
ACGGCGGGCG CGGCAGCGGT GGGCGGCGCG GCGCCGGCGC CCGCATCGGG CGCGGCGGTG
GCTGCGCCGG CCTCGGGCAC GGCCGAAGCG CCGAATCCGG CCAGCGAAAC GAACGTGCCG
GCGATGCAGG TGGCGCCGCC GTCGCCGGGC GGGTTCCGGT TCCCGAGCAT CCGGCTGCAC
TGA
|
|---|
| Protein sequence | MHTIRIRHAA LAMAAVAALS GCATVQTPTK GDPLEGFNRS MYKFNDTVDT YALKPVAKGY
QYVVPQPVRD SVTNFFSNIG DVYIAANNIV QLRIADGVGD IMRVVINTVF GVGGLFDVAT
IAKLPKHTAD FGITMGRYGV PSGPYLVLPL LGPSTLRDTA GLGVDYVGNP LTYVKPDGLS
WGLFGVNLVN TRANLLGAGD VLDAAALDKY SFVRNAYLQR RQMLISNARG EAAATSSNDA
LPKYDLPEDG AAPAAAGAAG TAGAAAVGGA APAPASGAAV AAPASGTAEA PNPASETNVP
AMQVAPPSPG GFRFPSIRLH
|
|---|
| |