Gene Bcen2424_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_0393 
SymbolaroB 
ID4448115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp438779 
End bp439858 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID639692410 
Product3-dehydroquinate synthase 
Protein accessionYP_834040 
Protein GI116688417 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTG TCAACGTCGA TCTGGGCGAC CGCGCCTATC CGATTCATAT TGGCGCCGGC 
CTGATCGGCC GCACCGAGCT GTTCGCGCCC CACATCAAGG GTTCGTCCGT CACGATCGTC
ACGAACACGA CGGTCGATCC GCTCTATGGC GACGCGCTGC GCGCGGCGCT CGCGCCGCTC
GGCAAGCGTG TGTCGACGGT CGTGCTGCCT GACGGCGAGG CGTACAAGAA CTGGGAAACG
CTGAACCTGA TCTTCGACGG CCTGCTGACG GATCACGCCG ATCGCAAGAC GACGCTCGTC
GCGCTCGGCG GCGGCGTGGT CGGCGACATG ACCGGCTTTG CCGCCGCGTG CTACATGCGC
GGCGTGCCGT TCATCCAGGT ACCGACGACG CTGCTGTCGC AGGTCGATTC GTCGGTCGGC
GGCAAGACGG GCATCAACCA CCCGCTCGGC AAGAACATGA TCGGCGCGTT CTACCAGCCG
CAGGCCGTGA TCGCGGACAT CGGCGCGTTG ACGACGCTGC CCGATCGCGA GCTGGCGGCG
GGCGTGGCCG AAGTCATCAA GACGGGCGCG ATCGCCGATG CCGGGTTCTT CGACTGGATC
GAGGCGAACG TCGAGGCGCT GAACCGTCGC GAGCCGGCAG CGCTCGCGCA CGCGGTGAAG
CGTTCGTGCG AGATCAAGGC GAGCGTCGTC GCGGCCGACG AACGCGAAGG CGGCCTGCGC
GCGATCCTGA ATTTCGGCCA CACGTTCGGC CATGCGATCG AGGCCGGGCT CGGCTATGGC
GAATGGCTGC ACGGCGAGGC GGTCGGCTGC GGGATGGTGA TGGCGGGCGA CCTGTCGGTG
CGGCTCGGCC TCCTCGACGA AGCGTCGCGG CAACGCCTCG ATGCGGTGAT CGCGGCCGCG
CATCTGCCGA CCCGCGGGCC CGCGCTCGGC GACGCGCGCT ACATGGACCT GATGCGCGTC
GACAAGAAGG CCGAGGCCGG CGCGATCAAG TTCATCCTGC TGAAGCGATT CGGCGATACG
CTGATCACGC AGGCGCCGGA CGAAGCGGTA TTCGCTACAC TGGCGCAGAC GACGCGCTAA
 
Protein sequence
MITVNVDLGD RAYPIHIGAG LIGRTELFAP HIKGSSVTIV TNTTVDPLYG DALRAALAPL 
GKRVSTVVLP DGEAYKNWET LNLIFDGLLT DHADRKTTLV ALGGGVVGDM TGFAAACYMR
GVPFIQVPTT LLSQVDSSVG GKTGINHPLG KNMIGAFYQP QAVIADIGAL TTLPDRELAA
GVAEVIKTGA IADAGFFDWI EANVEALNRR EPAALAHAVK RSCEIKASVV AADEREGGLR
AILNFGHTFG HAIEAGLGYG EWLHGEAVGC GMVMAGDLSV RLGLLDEASR QRLDAVIAAA
HLPTRGPALG DARYMDLMRV DKKAEAGAIK FILLKRFGDT LITQAPDEAV FATLAQTTR